RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GPX1P07203 203 aa16.96■□□□□ 0.31
CPSF4-204ENST00000436336 RBMY1DP0C7P1 496 aaKnown RBP16.96■□□□□ 0.31
CPSF4-204ENST00000436336 CDKN1BP46527 198 aa16.96■□□□□ 0.31
CPSF4-204ENST00000436336 FAM231DQ6ZW35 169 aa16.96■□□□□ 0.31
CPSF4-204ENST00000436336 Q8N1Y9 231 aa16.96■□□□□ 0.31
CPSF4-204ENST00000436336 DEFB125Q8N687 156 aa16.96■□□□□ 0.31
CPSF4-204ENST00000436336 C7orf77A4D0Y5 90 aa16.96■□□□□ 0.3
CPSF4-204ENST00000436336 KLLNB2CW77 178 aa16.96■□□□□ 0.3
CPSF4-204ENST00000436336 G3V4G9 280 aa16.96■□□□□ 0.3
CPSF4-204ENST00000436336 CRIP1P50238 77 aa16.96■□□□□ 0.3
CPSF4-204ENST00000436336 ZNF80P51504 273 aaPredicted RBP16.96■□□□□ 0.3
CPSF4-204ENST00000436336 ERVFC1-1P60608 527 aa16.96■□□□□ 0.3
CPSF4-204ENST00000436336 IBA57Q5T440 356 aaKnown RBP16.96■□□□□ 0.3
CPSF4-204ENST00000436336 LINC00322Q6ZN03 302 aaPredicted RBP16.96■□□□□ 0.3
CPSF4-204ENST00000436336 PKD1L1Q8TDX9 2849 aa16.95■□□□□ 0.3
CPSF4-204ENST00000436336 C19orf71A6NCJ1 209 aa16.95■□□□□ 0.3
CPSF4-204ENST00000436336 KRTAP10-11P60412 298 aa16.95■□□□□ 0.3
CPSF4-204ENST00000436336 FAM162BQ5T6X4 162 aa16.95■□□□□ 0.3
CPSF4-204ENST00000436336 PRR9Q5T870 116 aa16.95■□□□□ 0.3
CPSF4-204ENST00000436336 RNASE7Q9H1E1 156 aaKnown RBP16.95■□□□□ 0.3
CPSF4-204ENST00000436336 OSTCQ9NRP0 149 aa16.95■□□□□ 0.3
CPSF4-204ENST00000436336 J3KRW8 73 aa16.94■□□□□ 0.3
CPSF4-204ENST00000436336 MT-ND4LP03901 98 aa16.94■□□□□ 0.3
CPSF4-204ENST00000436336 SPINK13Q1W4C9 94 aa16.94■□□□□ 0.3
CPSF4-204ENST00000436336 RNF212Q495C1 297 aa16.94■□□□□ 0.3
CPSF4-204ENST00000436336 ATRAIDQ6UW56 229 aa16.94■□□□□ 0.3
CPSF4-204ENST00000436336 DAZAP1Q96EP5 407 aaKnown RBP16.94■□□□□ 0.3
CPSF4-204ENST00000436336 FABP5P3A8MUU1 101 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 M0R2Z0 102 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 PFN1P07737 140 aaKnown RBP16.93■□□□□ 0.3
CPSF4-204ENST00000436336 C15orf54Q8N8G6 183 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 NUDT10Q8NFP7 164 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 OR10G8Q8NGN5 311 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 ANAPC16Q96DE5 110 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 NUDT11Q96G61 164 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 RPS10P5Q9NQ39 176 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 A0A087WWC5 75 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 PPP1R2P9O14990 202 aa16.93■□□□□ 0.3
CPSF4-204ENST00000436336 SH2D1AO60880 128 aa16.92■□□□□ 0.3
CPSF4-204ENST00000436336 NUTF2P61970 127 aaKnown RBP16.92■□□□□ 0.3
CPSF4-204ENST00000436336 BTN1A1Q13410 526 aa16.92■□□□□ 0.3
CPSF4-204ENST00000436336 KIR3DS1Q14943 382 aa16.92■□□□□ 0.3
CPSF4-204ENST00000436336 Q6AWC8 147 aa16.92■□□□□ 0.3
CPSF4-204ENST00000436336 CTDSP1Q9GZU7 261 aa16.92■□□□□ 0.3
CPSF4-204ENST00000436336 P01737 135 aa16.91■□□□□ 0.3
CPSF4-204ENST00000436336 RNASE4P34096 147 aaKnown RBP16.91■□□□□ 0.3
CPSF4-204ENST00000436336 SRD5A3Q9H8P0 318 aa16.91■□□□□ 0.3
CPSF4-204ENST00000436336 TRAV21A0A0B4J279 112 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 C7orf71A4D174 169 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 AMBPP02760 352 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 FXYD7P58549 80 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 TRAV12-2A0A075B6T6 113 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 GATCO43716 136 aaKnown RBP16.9■□□□□ 0.3
CPSF4-204ENST00000436336 GFI1BQ5VTD9 330 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 TMEM242Q9NWH2 141 aa16.9■□□□□ 0.3
CPSF4-204ENST00000436336 ZNF705GA8MUZ8 300 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-204ENST00000436336 CRXO43186 299 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-204ENST00000436336 MORN3Q6PF18 240 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-204ENST00000436336 V9GYV3 84 aa16.89■□□□□ 0.29
CPSF4-204ENST00000436336 H7BYZ3 331 aa16.88■□□□□ 0.29
CPSF4-204ENST00000436336 RPL35AP18077 110 aaKnown RBP16.88■□□□□ 0.29
CPSF4-204ENST00000436336 RPP21Q9H633 154 aaKnown RBP16.88■□□□□ 0.29
CPSF4-204ENST00000436336 TRAV12-3A0A0B4J271 114 aa16.87■□□□□ 0.29
CPSF4-204ENST00000436336 ZNF324O75467 553 aaPredicted RBP16.86■□□□□ 0.29
CPSF4-204ENST00000436336 CT83Q5H943 113 aa16.86■□□□□ 0.29
CPSF4-204ENST00000436336 Q6ZQT7 251 aa16.86■□□□□ 0.29
CPSF4-204ENST00000436336 LINC01559Q495D7 138 aa16.85■□□□□ 0.29
CPSF4-204ENST00000436336 OR2D3Q8NGH3 330 aa16.85■□□□□ 0.29
CPSF4-204ENST00000436336 LOC102724200A0A096LPH7 203 aaPredicted RBP16.84■□□□□ 0.29
CPSF4-204ENST00000436336 TMEM189A5PLL7 270 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 INSP01308 110 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 ORM1P02763 201 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 C20orf144Q9BQM9 153 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 C1QTNF4Q9BXJ3 329 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 TUBA4BQ9H853 241 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 C11orf21Q9P2W6 132 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 XCL2Q9UBD3 114 aa16.84■□□□□ 0.29
CPSF4-204ENST00000436336 RPL19P84098 196 aaKnown RBP16.84■□□□□ 0.29
CPSF4-204ENST00000436336 KPRPQ5T749 579 aaPredicted RBP16.84■□□□□ 0.29
CPSF4-204ENST00000436336 IGHV4-30-4P0DP06 118 aa16.83■□□□□ 0.28
CPSF4-204ENST00000436336 CSTL1Q9H114 145 aa16.83■□□□□ 0.28
CPSF4-204ENST00000436336 IGKV3D-20A0A0C4DH25 116 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 A8MWL6 223 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 CA1P00915 261 aaPredicted RBP16.82■□□□□ 0.28
CPSF4-204ENST00000436336 RPS20P60866 119 aaKnown RBP16.82■□□□□ 0.28
CPSF4-204ENST00000436336 IL36BQ9NZH7 164 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 XKRY2A2RUG3 117 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 CXorf65A6NEN9 183 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 SCO1O75880 301 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 GIG44P09565 113 aaPredicted RBP16.82■□□□□ 0.28
CPSF4-204ENST00000436336 RBMY1A1P0DJD3 496 aaKnown RBP16.82■□□□□ 0.28
CPSF4-204ENST00000436336 RBMY1CP0DJD4 496 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 RBMY1FQ15415 496 aaKnown RBP16.82■□□□□ 0.28
CPSF4-204ENST00000436336 NAGKQ9UJ70 344 aa16.82■□□□□ 0.28
CPSF4-204ENST00000436336 A8MZ25 164 aa16.81■□□□□ 0.28
CPSF4-204ENST00000436336 FAM159AQ6UWV7 190 aa16.81■□□□□ 0.28
CPSF4-204ENST00000436336 TSKUQ8WUA8 353 aa16.81■□□□□ 0.28
CPSF4-204ENST00000436336 IMMP2LQ96T52 175 aa16.81■□□□□ 0.28
CPSF4-204ENST00000436336 TMSB15BA0A087X1C1 80 aa16.8■□□□□ 0.28
CPSF4-204ENST00000436336 KIR2DL5BA0A0G2JN68 375 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms