RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RAB24Q969Q5 203 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 PHYHIPLQ96FC7 376 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 SMIM3Q9BZL3 60 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 ACTR3CQ9C0K3 210 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-203ENST00000428014 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
SMC1A-203ENST00000428014 TRAV12-2A0A075B6T6 113 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 CTXND1A0A1B0GTU2 59 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 IGLL5B9A064 214 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 K7EQM0 130 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 GPX1P07203 203 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 OR10J4P0C629 311 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 SEC11BP0C7V7 166 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
SMC1A-203ENST00000428014 FHITP49789 147 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 RANP62826 216 aaKnown RBP6.47□□□□□ -1.37
SMC1A-203ENST00000428014 DPPA3Q6W0C5 159 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 HSD17B11Q8NBQ5 300 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 RYR2Q92736 4967 aa6.47□□□□□ -1.37
SMC1A-203ENST00000428014 KANTRA0A1W2PQU2 76 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 ZNF705GA8MUZ8 300 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-203ENST00000428014 SNURFLB1AK76 121 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 H3BTX0 84 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 BCL2L11O43521 198 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 CIDEAO60543 219 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 LY6G6CO95867 125 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 GCHFRP30047 84 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 TCL1AP56279 114 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 RAB2AP61019 212 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 SLAQ13239 276 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 LGALSLQ3ZCW2 172 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-203ENST00000428014 PIK3CD-AS1Q5SR53 167 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 TMUB2Q71RG4 321 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 COX8CQ7Z4L0 72 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 C9orf62Q8N4C0 152 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 POM121L12Q8N7R1 296 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 C11orf72Q8NBR9 251 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 ARPC5LQ9BPX5 153 aa6.46□□□□□ -1.38
SMC1A-203ENST00000428014 MUC4Q99102 2169 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 IGHV1OR15-1A0A075B7D0 117 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 PGPA6NDG6 321 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 ARL14EPLP0DKL9 152 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 AZU1P20160 251 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 AKR1C8PQ5T2L2 129 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 RPL7L1Q6DKI1 246 aaKnown RBP6.45□□□□□ -1.38
SMC1A-203ENST00000428014 FAM122CQ6P4D5 195 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 HIST1H2BAQ96A08 127 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 KCNS1Q96KK3 526 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 VGLL1Q99990 258 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 SPXQ9BT56 116 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 CYTL1Q9NRR1 136 aa6.45□□□□□ -1.38
SMC1A-203ENST00000428014 TRGV11A0A075B6L2 103 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 IGKV2-40A0A087WW87 121 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-203ENST00000428014 TRAV12-3A0A0B4J271 114 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 TRAV21A0A0B4J279 112 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 TRBV6-1A0A0K0K1D8 114 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 SPINK4O60575 86 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 IGKV2D-40P01614 121 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-203ENST00000428014 TCRAP04437 139 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 RAB5CP51148 216 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 EMP1P54849 157 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 SAPCD1Q5SSQ6 148 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 EIF5AL1Q6IS14 154 aaKnown RBP6.44□□□□□ -1.38
SMC1A-203ENST00000428014 SLC51BQ86UW2 128 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 IQCF2Q8IXL9 164 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 CYB561D1Q8N8Q1 229 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 TMEM75Q8N9X5 138 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 STOML3Q8TAV4 291 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 RASL10AQ92737 203 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 PTH2Q96A98 100 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 ATG101Q9BSB4 218 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 NDFIP1Q9BT67 221 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 KLF12Q9Y4X4 402 aa6.44□□□□□ -1.38
SMC1A-203ENST00000428014 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 SNRPCP09234 159 aaKnown RBP6.43□□□□□ -1.38
SMC1A-203ENST00000428014 TPT1P13693 172 aaKnown RBP6.43□□□□□ -1.38
SMC1A-203ENST00000428014 PPT1P50897 306 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 NKX2-5P52952 324 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-203ENST00000428014 ERCC8Q13216 396 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 KIR3DS1Q14943 382 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 LINC00336Q6ZUF6 198 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 Q8N3U1 123 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 MBD3L1Q8WWY6 194 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 TXNDC17Q9BRA2 123 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-203ENST00000428014 NOP10Q9NPE3 64 aaKnown RBP6.43□□□□□ -1.38
SMC1A-203ENST00000428014 EPDR1Q9UM22 224 aa6.43□□□□□ -1.38
SMC1A-203ENST00000428014 F6UZH7 168 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 RNASE4P34096 147 aaKnown RBP6.42□□□□□ -1.38
SMC1A-203ENST00000428014 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 BTN1A1Q13410 526 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 ANKRD39Q53RE8 183 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 FAM159AQ6UWV7 190 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 SH3BGRL3Q9H299 93 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 TMPRSS5Q9H3S3 457 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 ZFP30Q9Y2G7 519 aa6.42□□□□□ -1.38
SMC1A-203ENST00000428014 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 GGTLC3B5MD39 225 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 K7EP13 123 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 IGLV2-11P01706 119 aa6.41□□□□□ -1.38
SMC1A-203ENST00000428014 S100A9P06702 114 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms