RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 HMGB3O15347 200 aaKnown RBP8.91□□□□□ -0.98
SGCE-203ENST00000425444 ZNF324O75467 553 aaPredicted RBP8.91□□□□□ -0.98
SGCE-203ENST00000425444 NMBP08949 121 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 GIPP09681 153 aaPredicted RBP8.91□□□□□ -0.98
SGCE-203ENST00000425444 PRR9Q5T870 116 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 PQLC2Q6ZP29 291 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 ZFAND2AQ8N6M9 145 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 INO80EQ8NBZ0 244 aaPredicted RBP8.91□□□□□ -0.98
SGCE-203ENST00000425444 RXFP4Q8TDU9 374 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 ASB13Q8WXK3 278 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 AQP10Q96PS8 301 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 ARPC5LQ9BPX5 153 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 GSN-AS1Q9NRJ2 163 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
SGCE-203ENST00000425444 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 FXYD6-FXYD2A0A087WZ82 144 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 DIRC3C9JPN6 131 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 CDC34P49427 236 aaPredicted RBP8.9□□□□□ -0.98
SGCE-203ENST00000425444 DAZ2Q13117 558 aaKnown RBP8.9□□□□□ -0.98
SGCE-203ENST00000425444 RGS21Q2M5E4 152 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 ANXA2RQ3ZCQ2 193 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 C1orf134Q5TEV5 83 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 Q6ZR54 194 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 Q6ZTI0 123 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 LINC00612Q8N6U2 182 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.98
SGCE-203ENST00000425444 IGHV1OR15-1A0A075B7D0 117 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 TRAV26-1A0A087WT03 109 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 TRGV1A0A0A0MS02 117 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 TRBV7-9A0A0J9YWB2 115 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 A0A0J9YY99 117 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 PGPA6NDG6 321 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 ATP6V0CP27449 155 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 CCL18P55774 89 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 OR2G3Q8NGZ4 309 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 GNPNAT1Q96EK6 184 aaPredicted RBP8.89□□□□□ -0.99
SGCE-203ENST00000425444 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
SGCE-203ENST00000425444 TMPRSS5Q9H3S3 457 aa8.89□□□□□ -0.99
SGCE-203ENST00000425444 MBP02144 154 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 ARL14EPLP0DKL9 152 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
SGCE-203ENST00000425444 ZNF415Q09FC8 603 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 Q5BKY6 102 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 IBA57Q5T440 356 aaKnown RBP8.88□□□□□ -0.99
SGCE-203ENST00000425444 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 OR2T35Q8NGX2 323 aa8.88□□□□□ -0.99
SGCE-203ENST00000425444 BORCS7-ASMTA0A0B4J1R7 106 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 EPM2AB3EWF7 344 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 HOXA5P20719 270 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 TCL1AP56279 114 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 TNP2Q05952 138 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 MUC21Q5SSG8 566 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 Q6ZQT7 251 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 GOLT1AQ6ZVE7 132 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 TP53TG3Q9ULZ0 132 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 KLF12Q9Y4X4 402 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 LENEPQ9Y5L5 61 aa8.87□□□□□ -0.99
SGCE-203ENST00000425444 STAG3L2P0CL84 134 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 STAG3L3P0CL85 134 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 GNG5P63218 68 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 SERF2P84101 59 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 RPL7L1Q6DKI1 246 aaKnown RBP8.86□□□□□ -0.99
SGCE-203ENST00000425444 IQCF2Q8IXL9 164 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 TMED6Q8WW62 240 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 RAB24Q969Q5 203 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 ACTR3CQ9C0K3 210 aaPredicted RBP8.86□□□□□ -0.99
SGCE-203ENST00000425444 MRPL16Q9NX20 251 aaKnown RBP8.86□□□□□ -0.99
SGCE-203ENST00000425444 NAGKQ9UJ70 344 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 TNFSF18Q9UNG2 199 aa8.86□□□□□ -0.99
SGCE-203ENST00000425444 RNF222A6NCQ9 220 aa8.85□□□□□ -0.99
SGCE-203ENST00000425444 SPINK4O60575 86 aa8.85□□□□□ -0.99
SGCE-203ENST00000425444 GCHFRP30047 84 aa8.85□□□□□ -0.99
SGCE-203ENST00000425444 FAM159AQ6UWV7 190 aa8.85□□□□□ -0.99
SGCE-203ENST00000425444 SSX7Q7RTT5 188 aa8.85□□□□□ -0.99
SGCE-203ENST00000425444 NDFIP1Q9BT67 221 aa8.85□□□□□ -0.99
SGCE-203ENST00000425444 TRGV11A0A075B6L2 103 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 TRAV8-1A0A0A6YYK1 113 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 F6UZH7 168 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 CXorf1O96002 111 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 IGHV3-53P01767 116 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 TMEM183BQ1AE95 376 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 Q6AWC8 147 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 TMEM183AQ8IXX5 376 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 ARL6IP6Q8N6S5 226 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 ST6GAL2Q96JF0 529 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 C18orf15Q96N68 181 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 TREM1Q9NP99 234 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 TMEM167BQ9NRX6 74 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 NACAE9PAV3 2078 aa8.84□□□□□ -0.99
SGCE-203ENST00000425444 SERTM2A0A1B0GWG4 89 aa8.83□□□□□ -1
SGCE-203ENST00000425444 K7EQM0 130 aa8.83□□□□□ -1
SGCE-203ENST00000425444 ARPC5O15511 151 aa8.83□□□□□ -1
SGCE-203ENST00000425444 C5orf17Q8NAS9 161 aa8.83□□□□□ -1
SGCE-203ENST00000425444 TRAV21A0A0B4J279 112 aa8.82□□□□□ -1
SGCE-203ENST00000425444 NBDYA0A0U1RRE5 68 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms