RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ATG101Q9BSB4 218 aa15.4■□□□□ 0.06
TRAF4-204ENST00000422344 IGHV1OR15-1A0A075B7D0 117 aa15.39■□□□□ 0.05
TRAF4-204ENST00000422344 STAG3L2P0CL84 134 aa15.39■□□□□ 0.05
TRAF4-204ENST00000422344 STAG3L3P0CL85 134 aa15.39■□□□□ 0.05
TRAF4-204ENST00000422344 OR5I1Q13606 314 aa15.39■□□□□ 0.05
TRAF4-204ENST00000422344 ACTR3CQ9C0K3 210 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-204ENST00000422344 LENEPQ9Y5L5 61 aa15.39■□□□□ 0.05
TRAF4-204ENST00000422344 Q6ZTI0 123 aa15.38■□□□□ 0.05
TRAF4-204ENST00000422344 GOLT1AQ6ZVE7 132 aa15.38■□□□□ 0.05
TRAF4-204ENST00000422344 ARL6IP6Q8N6S5 226 aa15.38■□□□□ 0.05
TRAF4-204ENST00000422344 C11orf72Q8NBR9 251 aa15.38■□□□□ 0.05
TRAF4-204ENST00000422344 TMED6Q8WW62 240 aa15.38■□□□□ 0.05
TRAF4-204ENST00000422344 PKHD1P08F94 4074 aa15.38■□□□□ 0.05
TRAF4-204ENST00000422344 TRGV2A0A075B6R0 118 aa15.37■□□□□ 0.05
TRAF4-204ENST00000422344 FAT2Q9NYQ8 4349 aa15.36■□□□□ 0.05
TRAF4-204ENST00000422344 TRGV1A0A0A0MS02 117 aa15.36■□□□□ 0.05
TRAF4-204ENST00000422344 ARPC5O15511 151 aa15.36■□□□□ 0.05
TRAF4-204ENST00000422344 CXorf1O96002 111 aa15.36■□□□□ 0.05
TRAF4-204ENST00000422344 GCHFRP30047 84 aa15.36■□□□□ 0.05
TRAF4-204ENST00000422344 TCL1AP56279 114 aa15.36■□□□□ 0.05
TRAF4-204ENST00000422344 IBA57Q5T440 356 aaKnown RBP15.36■□□□□ 0.05
TRAF4-204ENST00000422344 M0R2N4 97 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 TAAR5O14804 337 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 GNG5P63218 68 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 MUC21Q5SSG8 566 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 Q6ZQT7 251 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 IQCF2Q8IXL9 164 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 ST6GAL2Q96JF0 529 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 TMEM167BQ9NRX6 74 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 TP53TG3Q9ULZ0 132 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 KLF12Q9Y4X4 402 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 DNAH2Q9P225 4427 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 DNAH17Q9UFH2 4485 aa15.35■□□□□ 0.05
TRAF4-204ENST00000422344 IGLV2-18A0A075B6J9 118 aa15.34■□□□□ 0.05
TRAF4-204ENST00000422344 TRAV26-1A0A087WT03 109 aa15.34■□□□□ 0.05
TRAF4-204ENST00000422344 FAM3BP58499 235 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-204ENST00000422344 ZNF415Q09FC8 603 aa15.34■□□□□ 0.05
TRAF4-204ENST00000422344 LINC00336Q6ZUF6 198 aa15.34■□□□□ 0.05
TRAF4-204ENST00000422344 TMPRSS5Q9H3S3 457 aa15.34■□□□□ 0.05
TRAF4-204ENST00000422344 SERTM2A0A1B0GWG4 89 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 G3V3Q6 166 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 K7EQM0 130 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 CCL18P55774 89 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 Q6AWC8 147 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 FAM159AQ6UWV7 190 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 C5orf17Q8NAS9 161 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 NDFIP1Q9BT67 221 aa15.33■□□□□ 0.04
TRAF4-204ENST00000422344 A0A0J9YY99 117 aa15.32■□□□□ 0.04
TRAF4-204ENST00000422344 SPINK4O60575 86 aa15.32■□□□□ 0.04
TRAF4-204ENST00000422344 HOXA5P20719 270 aa15.32■□□□□ 0.04
TRAF4-204ENST00000422344 LGALS9BQ3B8N2 356 aa15.32■□□□□ 0.04
TRAF4-204ENST00000422344 AKR1C8PQ5T2L2 129 aa15.32■□□□□ 0.04
TRAF4-204ENST00000422344 NAGKQ9UJ70 344 aa15.32■□□□□ 0.04
TRAF4-204ENST00000422344 TRAV8-1A0A0A6YYK1 113 aa15.31■□□□□ 0.04
TRAF4-204ENST00000422344 SMLR1H3BR10 107 aa15.31■□□□□ 0.04
TRAF4-204ENST00000422344 SUN5Q8TC36 379 aa15.31■□□□□ 0.04
TRAF4-204ENST00000422344 C18orf15Q96N68 181 aa15.31■□□□□ 0.04
TRAF4-204ENST00000422344 TREM1Q9NP99 234 aa15.31■□□□□ 0.04
TRAF4-204ENST00000422344 MRPL16Q9NX20 251 aaKnown RBP15.31■□□□□ 0.04
TRAF4-204ENST00000422344 TRGV11A0A075B6L2 103 aa15.3■□□□□ 0.04
TRAF4-204ENST00000422344 CTXND1A0A1B0GTU2 59 aa15.3■□□□□ 0.04
TRAF4-204ENST00000422344 F6UZH7 168 aa15.3■□□□□ 0.04
TRAF4-204ENST00000422344 TCRAP04437 139 aa15.3■□□□□ 0.04
TRAF4-204ENST00000422344 MUC4Q99102 2169 aa15.29■□□□□ 0.04
TRAF4-204ENST00000422344 TRAV21A0A0B4J279 112 aa15.29■□□□□ 0.04
TRAF4-204ENST00000422344 A0A1B0GVY2 172 aa15.29■□□□□ 0.04
TRAF4-204ENST00000422344 SUMO1P63165 101 aaKnown RBP15.29■□□□□ 0.04
TRAF4-204ENST00000422344 TMEM183BQ1AE95 376 aa15.29■□□□□ 0.04
TRAF4-204ENST00000422344 SSX7Q7RTT5 188 aa15.29■□□□□ 0.04
TRAF4-204ENST00000422344 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
TRAF4-204ENST00000422344 H3BNG1 76 aa15.28■□□□□ 0.04
TRAF4-204ENST00000422344 SGK494Q96LW2 274 aa15.28■□□□□ 0.04
TRAF4-204ENST00000422344 GGTLC3B5MD39 225 aa15.27■□□□□ 0.04
TRAF4-204ENST00000422344 CYTL1Q9NRR1 136 aa15.27■□□□□ 0.04
TRAF4-204ENST00000422344 MDFICQ9P1T7 246 aa15.27■□□□□ 0.04
TRAF4-204ENST00000422344 EPDR1Q9UM22 224 aa15.27■□□□□ 0.04
TRAF4-204ENST00000422344 A0A1W2PRE2 83 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 IGHV3-53P01767 116 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 MED14OSP0DP75 135 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 ZNF726P1Q15940 193 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 CYB561D1Q8N8Q1 229 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 TVP23CQ96ET8 276 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 SPXQ9BT56 116 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 PSG8Q9UQ74 426 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 LINC00588Q9Y4M8 146 aa15.26■□□□□ 0.03
TRAF4-204ENST00000422344 ZNF345Q14585 488 aa15.25■□□□□ 0.03
TRAF4-204ENST00000422344 TDRG1Q3Y452 100 aa15.25■□□□□ 0.03
TRAF4-204ENST00000422344 ZFP69Q49AA0 526 aa15.25■□□□□ 0.03
TRAF4-204ENST00000422344 SOHLH1Q5JUK2 328 aa15.25■□□□□ 0.03
TRAF4-204ENST00000422344 Q6ZR54 194 aa15.25■□□□□ 0.03
TRAF4-204ENST00000422344 KCNRGQ8N5I3 272 aa15.25■□□□□ 0.03
TRAF4-204ENST00000422344 DYNC1H1Q14204 4646 aaKnown RBP15.24■□□□□ 0.03
TRAF4-204ENST00000422344 FBLL1A6NHQ2 334 aaKnown RBP15.24■□□□□ 0.03
TRAF4-204ENST00000422344 PRSS29PA6NIE9 313 aa15.24■□□□□ 0.03
TRAF4-204ENST00000422344 IFNA7P01567 189 aa15.24■□□□□ 0.03
TRAF4-204ENST00000422344 FGF8P55075 233 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-204ENST00000422344 FLI1Q01543 452 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-204ENST00000422344 KCNS1Q96KK3 526 aa15.24■□□□□ 0.03
TRAF4-204ENST00000422344 SDF2L1Q9HCN8 221 aa15.24■□□□□ 0.03
TRAF4-204ENST00000422344 NACAE9PAV3 2078 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms