RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 IGF2BP2-AS1Q96M15 143 aa11.45□□□□□ -0.58
DDX55-203ENST00000421670 B9D2Q9BPU9 175 aa11.45□□□□□ -0.58
DDX55-203ENST00000421670 PARLQ9H300 379 aa11.45□□□□□ -0.58
DDX55-203ENST00000421670 TGP01266 2768 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 TRBV20OR9-2A0A075B6H5 130 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 TRBV7-9A0A0J9YWB2 115 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 TRBV6-1A0A0K0K1D8 114 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 UBE2CO00762 179 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 AMBPP02760 352 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 Q6ZQT7 251 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
DDX55-203ENST00000421670 IGHV3OR16-12A0A075B7B8 117 aa11.43□□□□□ -0.58
DDX55-203ENST00000421670 C7orf71A4D174 169 aa11.43□□□□□ -0.58
DDX55-203ENST00000421670 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
DDX55-203ENST00000421670 S100A9P06702 114 aaKnown RBP11.43□□□□□ -0.58
DDX55-203ENST00000421670 Q6ZWC4 215 aa11.43□□□□□ -0.58
DDX55-203ENST00000421670 RCHY1Q96PM5 261 aa11.43□□□□□ -0.58
DDX55-203ENST00000421670 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
DDX55-203ENST00000421670 GCGP01275 180 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 GNG4P50150 75 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 TAS2R60P59551 318 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 SAPCD1Q5SSQ6 148 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 BAGE2Q86Y30 109 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 ZC2HC1AQ96GY0 325 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
DDX55-203ENST00000421670 LINC00862A6NCI5 91 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 ZNF80P51504 273 aaPredicted RBP11.41□□□□□ -0.58
DDX55-203ENST00000421670 SMUG1Q53HV7 270 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 SMIM7Q9BQ49 75 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 TMEM183AQ8IXX5 376 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 RNF183Q96D59 192 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 TMEM208Q9BTX3 173 aa11.41□□□□□ -0.58
DDX55-203ENST00000421670 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 SPRY2O43597 315 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 ZNF324O75467 553 aaPredicted RBP11.4□□□□□ -0.58
DDX55-203ENST00000421670 IGLV2-8P01709 118 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 Q6AWC8 147 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 SPATA25Q9BR10 227 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 OVOL2Q9BRP0 275 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 MLST8Q9BVC4 326 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
DDX55-203ENST00000421670 ZNF727A8MUV8 499 aa11.39□□□□□ -0.59
DDX55-203ENST00000421670 PRM2P04554 102 aa11.39□□□□□ -0.59
DDX55-203ENST00000421670 SFTA3P0C7M3 94 aa11.39□□□□□ -0.59
DDX55-203ENST00000421670 HTN1P15515 57 aa11.39□□□□□ -0.59
DDX55-203ENST00000421670 PRR27Q6MZM9 219 aa11.39□□□□□ -0.59
DDX55-203ENST00000421670 ZNF705AQ6ZN79 300 aaPredicted RBP11.39□□□□□ -0.59
DDX55-203ENST00000421670 C9JCJ5 164 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 MGST1P10620 155 aaKnown RBP11.38□□□□□ -0.59
DDX55-203ENST00000421670 CRIP1P50238 77 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 COX8CQ7Z4L0 72 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 OR11H2Q8NH07 326 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 LINC01587Q99440 93 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 TP53TG1Q9Y2A0 90 aa11.38□□□□□ -0.59
DDX55-203ENST00000421670 TRAV21A0A0B4J279 112 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 H7BYZ3 331 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 PFN1P07737 140 aaKnown RBP11.37□□□□□ -0.59
DDX55-203ENST00000421670 MUC21Q5SSG8 566 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 UQCC3Q6UW78 93 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 NAGKQ9UJ70 344 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 X6R8D5 127 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 K7EN84 100 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 SH2D1AO60880 128 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 SOHLH1Q5JUK2 328 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 EIF4E3Q8N5X7 224 aaKnown RBP11.37□□□□□ -0.59
DDX55-203ENST00000421670 ZMAT4Q9H898 229 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
DDX55-203ENST00000421670 ZNF705GA8MUZ8 300 aaPredicted RBP11.36□□□□□ -0.59
DDX55-203ENST00000421670 OR5I1Q13606 314 aa11.36□□□□□ -0.59
DDX55-203ENST00000421670 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
DDX55-203ENST00000421670 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
DDX55-203ENST00000421670 SMIM12Q96EX1 92 aa11.36□□□□□ -0.59
DDX55-203ENST00000421670 FAM74A3Q4VXF1 159 aa11.35□□□□□ -0.59
DDX55-203ENST00000421670 PYGO2Q9BRQ0 406 aa11.35□□□□□ -0.59
DDX55-203ENST00000421670 IGHV1OR15-1A0A075B7D0 117 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 FABP5P3A8MUU1 101 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 AZU1P20160 251 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 ANXA2RQ3ZCQ2 193 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
DDX55-203ENST00000421670 M0R036 132 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 DEFB4AO15263 64 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 ADCYAP1P18509 176 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 Q8NAQ8 132 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 TMEM218A2RU14 115 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 CBY3A6NI87 242 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 ORM1P02763 201 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 TMEM241Q24JQ0 296 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 NEU1Q99519 415 aa11.33□□□□□ -0.6
DDX55-203ENST00000421670 NAT8Q9UHE5 227 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms