RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 PROK1P58294 105 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 OR11H1Q8NG94 326 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 OVOL1O14753 267 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 SH2D1AO60880 128 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 CD28P10747 220 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 SLURP1P55000 103 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 HBBP68871 147 aa10.08□□□□□ -0.8
TMEM50B-201ENST00000420455 SONP18583 2426 aaKnown RBP10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 DEFB136Q30KP8 78 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 CRLF1O75462 422 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 KLHL30-AS1Q8NEE0 82 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 TMEM18Q96B42 140 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 RAX2Q96IS3 184 aa10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 TSSC4Q9Y5U2 329 aaPredicted RBP10.07□□□□□ -0.8
TMEM50B-201ENST00000420455 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 ZNF138P52744 262 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 OR9G4Q8NGQ1 327 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 C18orf32Q8TCD1 76 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 K7EQG2 157 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 HAX1O00165 279 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 FAM162BQ5T6X4 162 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 LINC00477Q96M19 166 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
TMEM50B-201ENST00000420455 ADARB2-AS1A8MUL3 147 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 CSN3P07498 182 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 ARMS2P0C7Q2 107 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 DNLZQ5SXM8 178 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 SIGLEC8Q9NYZ4 499 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 RNF114Q9Y508 228 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 TCF21O43680 179 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 IQCJQ1A5X6 159 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 Q6ZWC4 215 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 HIVEP1P15822 2718 aa10.05□□□□□ -0.8
TMEM50B-201ENST00000420455 ID1P41134 155 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 CITED2Q99967 270 aaPredicted RBP10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 NDFIP1Q9BT67 221 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 NSD1Q96L73 2696 aaPredicted RBP10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 CD33P20138 364 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 S100A12P80511 92 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 TMEM78Q5T7P6 136 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 ZNF738Q8NE65 137 aa10.04□□□□□ -0.8
TMEM50B-201ENST00000420455 DPF1Q92782 380 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 OR8A1Q8NGG7 326 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 Q6ZQT7 251 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 KCNS1Q96KK3 526 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 SELENOKQ9Y6D0 94 aa10.03□□□□□ -0.8
TMEM50B-201ENST00000420455 A0A1B0GUT8 65 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 LINC00587B1AMM8 73 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 C11orf21Q9P2W6 132 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 HIVEP2P31629 2446 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 FABP5P3A8MUU1 101 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 CCL24O00175 119 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 GPX1P07203 203 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 DEFB1P60022 68 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 KRTAP10-3P60369 221 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 Q6AWC8 147 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 OR10J6PQ8NGY7 276 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 ODF3Q96PU9 254 aa10.02□□□□□ -0.81
TMEM50B-201ENST00000420455 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 DUX3Q96PT4 197 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 LOC102724200A0A096LPH7 203 aaPredicted RBP10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 M0QZ24 198 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 PAFAH1B2P68402 229 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 PRR9Q5T870 116 aa10.01□□□□□ -0.81
TMEM50B-201ENST00000420455 A8MTW9 85 aa10□□□□□ -0.81
TMEM50B-201ENST00000420455 CTRLP40313 264 aa10□□□□□ -0.81
TMEM50B-201ENST00000420455 DEFB114Q30KQ6 69 aa10□□□□□ -0.81
TMEM50B-201ENST00000420455 KHDC1LQ5JSQ8 128 aa10□□□□□ -0.81
TMEM50B-201ENST00000420455 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
TMEM50B-201ENST00000420455 TPPP3Q9BW30 176 aa10□□□□□ -0.81
TMEM50B-201ENST00000420455 TRAV25A0A0B4J276 109 aa9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 IGKV3D-20A0A0C4DH25 116 aa9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 ZNF493Q6ZR52 646 aa9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 NIT1Q86X76 327 aa9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 NDUFA11Q86Y39 141 aa9.99□□□□□ -0.81
TMEM50B-201ENST00000420455 CNFNQ9BYD5 112 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 381.9 ms