RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 HIST1H1AQ02539 215 aaPredicted RBP12.01□□□□□ -0.49
CDC42-203ENST00000400259 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
CDC42-203ENST00000400259 CRYBG3Q68DQ2 2970 aa12.01□□□□□ -0.49
CDC42-203ENST00000400259 IGHV1-24A0A0C4DH33 117 aa12□□□□□ -0.49
CDC42-203ENST00000400259 A1L4Q6 167 aa12□□□□□ -0.49
CDC42-203ENST00000400259 TMEM213A2RRL7 107 aa12□□□□□ -0.49
CDC42-203ENST00000400259 IGHV3-11P01762 117 aa12□□□□□ -0.49
CDC42-203ENST00000400259 IGHV4-59P01825 116 aa12□□□□□ -0.49
CDC42-203ENST00000400259 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
CDC42-203ENST00000400259 GPHB5Q86YW7 130 aa12□□□□□ -0.49
CDC42-203ENST00000400259 NPFFR1Q9GZQ6 430 aa12□□□□□ -0.49
CDC42-203ENST00000400259 BEX4Q9NWD9 120 aaPredicted RBP12□□□□□ -0.49
CDC42-203ENST00000400259 SOCS3O14543 225 aa12□□□□□ -0.49
CDC42-203ENST00000400259 TGFAP01135 160 aa12□□□□□ -0.49
CDC42-203ENST00000400259 C16orf92Q96LL3 132 aa12□□□□□ -0.49
CDC42-203ENST00000400259 LENEPQ9Y5L5 61 aa12□□□□□ -0.49
CDC42-203ENST00000400259 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
CDC42-203ENST00000400259 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 ORM1P02763 201 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 LRRC75A-AS1Q8N1F1 130 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 PSMB8P28062 276 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 FAM208BQ5VWN6 2430 aa11.99□□□□□ -0.49
CDC42-203ENST00000400259 PRRC2AP48634 2157 aaKnown RBP11.98□□□□□ -0.49
CDC42-203ENST00000400259 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
CDC42-203ENST00000400259 CCL25O15444 150 aa11.98□□□□□ -0.49
CDC42-203ENST00000400259 CRXO43186 299 aaPredicted RBP11.98□□□□□ -0.49
CDC42-203ENST00000400259 FBN2P35556 2912 aa11.98□□□□□ -0.49
CDC42-203ENST00000400259 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
CDC42-203ENST00000400259 IGHV4-31P0DP07 118 aa11.98□□□□□ -0.49
CDC42-203ENST00000400259 C20orf173Q96LM9 149 aa11.98□□□□□ -0.49
CDC42-203ENST00000400259 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 RNF223E7ERA6 249 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 LRRK2Q5S007 2527 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 K7EMT4 169 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 KRTAP10-9P60411 292 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 DEFB113Q30KQ7 82 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 TMEM191AQ9H0A3 160 aa11.97□□□□□ -0.49
CDC42-203ENST00000400259 DAZ1Q9NQZ3 744 aaKnown RBP11.97□□□□□ -0.49
CDC42-203ENST00000400259 PEF1Q9UBV8 284 aaKnown RBP11.97□□□□□ -0.49
CDC42-203ENST00000400259 IGKV3D-20A0A0C4DH25 116 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 TWIST1Q15672 202 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 ORMDL3Q8N138 153 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 ZNF738Q8NE65 137 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 C11orf21Q9P2W6 132 aa11.96□□□□□ -0.49
CDC42-203ENST00000400259 MUC21A0A0G2JKD1 596 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 MUC21A0A140T8X8 626 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 D6R8Y8 96 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 OVOL1O14753 267 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 LEPROTL1O95214 131 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 MRPL51Q4U2R6 128 aaKnown RBP11.95□□□□□ -0.5
CDC42-203ENST00000400259 MUC21Q5SSG8 566 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 LINC00477Q96M19 166 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 AP5S1Q9NUS5 200 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 VPREB3Q9UKI3 123 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 BATFQ16520 125 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
CDC42-203ENST00000400259 CBY3A6NI87 242 aa11.94□□□□□ -0.5
CDC42-203ENST00000400259 CSN3P07498 182 aa11.94□□□□□ -0.5
CDC42-203ENST00000400259 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
CDC42-203ENST00000400259 Q6YL49 198 aa11.94□□□□□ -0.5
CDC42-203ENST00000400259 RHPN1-AS1Q9BWJ2 59 aa11.94□□□□□ -0.5
CDC42-203ENST00000400259 SMPXQ9UHP9 88 aa11.94□□□□□ -0.5
CDC42-203ENST00000400259 SYS1-DBNDD2H3BUS1 97 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 TFPI2P48307 235 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 FAM106AQ4KMX7 169 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 TM4SF20Q53R12 229 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 Q5PR19 223 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 FA2HQ7L5A8 372 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 PRSS3P2Q8NHM4 247 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 USP9YO00507 2555 aaPredicted RBP11.93□□□□□ -0.5
CDC42-203ENST00000400259 OR10J6PQ8NGY7 276 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
CDC42-203ENST00000400259 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 HSPB8Q9UJY1 196 aa11.93□□□□□ -0.5
CDC42-203ENST00000400259 RNF185Q96GF1 192 aa11.92□□□□□ -0.5
CDC42-203ENST00000400259 FAM19A4Q96LR4 140 aa11.92□□□□□ -0.5
CDC42-203ENST00000400259 SIGLEC8Q9NYZ4 499 aa11.92□□□□□ -0.5
CDC42-203ENST00000400259 MSRB1Q9NZV6 116 aa11.92□□□□□ -0.5
CDC42-203ENST00000400259 TRAV9-2A0A087WT02 112 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 TRBV7-9A0A0J9YWB2 115 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 FOXE3Q13461 319 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 SAMD13Q5VXD3 122 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 ZFAND2AQ8N6M9 145 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 KLHDC1Q8N7A1 406 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 IGHV4-4A0A075B6R2 117 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 IGLL1P15814 213 aa11.91□□□□□ -0.5
CDC42-203ENST00000400259 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
CDC42-203ENST00000400259 PRR9Q5T870 116 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms