RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RBMY1BA6NDE4 496 aaKnown RBP15.64■□□□□ 0.09
CPNE1-204ENST00000397443 RBMY1EA6NEQ0 496 aaKnown RBP15.64■□□□□ 0.09
CPNE1-204ENST00000397443 RBMY1DP0C7P1 496 aaKnown RBP15.64■□□□□ 0.09
CPNE1-204ENST00000397443 RNASE4P34096 147 aaKnown RBP15.64■□□□□ 0.09
CPNE1-204ENST00000397443 RHEBQ15382 184 aa15.64■□□□□ 0.09
CPNE1-204ENST00000397443 IBA57Q5T440 356 aaKnown RBP15.64■□□□□ 0.09
CPNE1-204ENST00000397443 ZFAND2AQ8N6M9 145 aa15.64■□□□□ 0.09
CPNE1-204ENST00000397443 MGAM2Q2M2H8 2515 aa15.64■□□□□ 0.09
CPNE1-204ENST00000397443 NOTCH1P46531 2555 aa15.64■□□□□ 0.09
CPNE1-204ENST00000397443 DAZAP1Q96EP5 407 aaKnown RBP15.64■□□□□ 0.09
CPNE1-204ENST00000397443 FAM19A4Q96LR4 140 aa15.64■□□□□ 0.09
CPNE1-204ENST00000397443 BTN1A1Q13410 526 aa15.63■□□□□ 0.09
CPNE1-204ENST00000397443 AMTNQ6UX39 209 aa15.63■□□□□ 0.09
CPNE1-204ENST00000397443 NUDT10Q8NFP7 164 aa15.63■□□□□ 0.09
CPNE1-204ENST00000397443 NUDT11Q96G61 164 aa15.63■□□□□ 0.09
CPNE1-204ENST00000397443 LENEPQ9Y5L5 61 aa15.63■□□□□ 0.09
CPNE1-204ENST00000397443 SH2D1AO60880 128 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 MT-ND4LP03901 98 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 RPL35AP18077 110 aaKnown RBP15.62■□□□□ 0.09
CPNE1-204ENST00000397443 KRTAP10-11P60412 298 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 FAM162BQ5T6X4 162 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 OR10G8Q8NGN5 311 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 FAM110AQ9BQ89 295 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 B4DEV8 164 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 BIN3Q9NQY0 253 aa15.62■□□□□ 0.09
CPNE1-204ENST00000397443 ZNF705GA8MUZ8 300 aaPredicted RBP15.61■□□□□ 0.09
CPNE1-204ENST00000397443 CA1P00915 261 aaPredicted RBP15.61■□□□□ 0.09
CPNE1-204ENST00000397443 LEPP41159 167 aa15.61■□□□□ 0.09
CPNE1-204ENST00000397443 TMEM88Q6PEY1 159 aa15.61■□□□□ 0.09
CPNE1-204ENST00000397443 C15orf54Q8N8G6 183 aa15.61■□□□□ 0.09
CPNE1-204ENST00000397443 P01737 135 aa15.6■□□□□ 0.09
CPNE1-204ENST00000397443 CDKN1BP46527 198 aa15.6■□□□□ 0.09
CPNE1-204ENST00000397443 RPL19P84098 196 aaKnown RBP15.6■□□□□ 0.09
CPNE1-204ENST00000397443 H7BYZ3 331 aa15.6■□□□□ 0.09
CPNE1-204ENST00000397443 CRISP2P16562 243 aa15.6■□□□□ 0.09
CPNE1-204ENST00000397443 COX8CQ7Z4L0 72 aa15.6■□□□□ 0.09
CPNE1-204ENST00000397443 TRPT1Q86TN4 253 aaKnown RBP15.6■□□□□ 0.09
CPNE1-204ENST00000397443 TMSB15BA0A087X1C1 80 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 TRAV12-3A0A0B4J271 114 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 C19orf71A6NCJ1 209 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 GATCO43716 136 aaKnown RBP15.59■□□□□ 0.09
CPNE1-204ENST00000397443 PFN1P07737 140 aaKnown RBP15.59■□□□□ 0.09
CPNE1-204ENST00000397443 TSPOP30536 169 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 CBLN2Q8IUK8 224 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 SRD5A3Q9H8P0 318 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 OSTCQ9NRP0 149 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 NAGKQ9UJ70 344 aa15.59■□□□□ 0.09
CPNE1-204ENST00000397443 FABP5P3A8MUU1 101 aa15.58■□□□□ 0.09
CPNE1-204ENST00000397443 KLLNB2CW77 178 aa15.58■□□□□ 0.09
CPNE1-204ENST00000397443 GFI1BQ5VTD9 330 aa15.58■□□□□ 0.09
CPNE1-204ENST00000397443 Q8N1Y9 231 aa15.58■□□□□ 0.09
CPNE1-204ENST00000397443 ODF3Q96PU9 254 aa15.58■□□□□ 0.09
CPNE1-204ENST00000397443 V9GYV3 84 aa15.58■□□□□ 0.09
CPNE1-204ENST00000397443 ORM1P02763 201 aa15.58■□□□□ 0.08
CPNE1-204ENST00000397443 ANAPC16Q96DE5 110 aa15.58■□□□□ 0.08
CPNE1-204ENST00000397443 NBEAL1Q6ZS30 2694 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 TRBV7-9A0A0J9YWB2 115 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 A8MTW9 85 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 FAM231DQ6ZW35 169 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 OR2D3Q8NGH3 330 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 XCL2Q9UBD3 114 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 URGCP-MRPS24S4R325 110 aa15.57■□□□□ 0.08
CPNE1-204ENST00000397443 MUC21Q5SSG8 566 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 RPP21Q9H633 154 aaKnown RBP15.56■□□□□ 0.08
CPNE1-204ENST00000397443 C11orf21Q9P2W6 132 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 A0A087WWC5 75 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 C7orf71A4D174 169 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 PPP1R2P9O14990 202 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 GZMBP10144 247 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 EGFEM1PQ0D2K5 195 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 SAMD5Q5TGI4 173 aa15.56■□□□□ 0.08
CPNE1-204ENST00000397443 TCL1AP56279 114 aa15.55■□□□□ 0.08
CPNE1-204ENST00000397443 CTDSP1Q9GZU7 261 aa15.55■□□□□ 0.08
CPNE1-204ENST00000397443 TRAV21A0A0B4J279 112 aa15.55■□□□□ 0.08
CPNE1-204ENST00000397443 CRXO43186 299 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-204ENST00000397443 NUTF2P61970 127 aaKnown RBP15.55■□□□□ 0.08
CPNE1-204ENST00000397443 TMEM189A5PLL7 270 aa15.54■□□□□ 0.08
CPNE1-204ENST00000397443 TUBA4BQ9H853 241 aa15.54■□□□□ 0.08
CPNE1-204ENST00000397443 Q6AWC8 147 aa15.53■□□□□ 0.08
CPNE1-204ENST00000397443 GRIFINA4D1Z8 144 aa15.53■□□□□ 0.08
CPNE1-204ENST00000397443 RBMY1A1P0DJD3 496 aaKnown RBP15.53■□□□□ 0.08
CPNE1-204ENST00000397443 RBMY1CP0DJD4 496 aa15.53■□□□□ 0.08
CPNE1-204ENST00000397443 RBMY1FQ15415 496 aaKnown RBP15.53■□□□□ 0.08
CPNE1-204ENST00000397443 CLUHP3Q96NS8 147 aa15.53■□□□□ 0.08
CPNE1-204ENST00000397443 PRB2P02812 416 aaPredicted RBP15.52■□□□□ 0.07
CPNE1-204ENST00000397443 FAM3BP58499 235 aaPredicted RBP15.52■□□□□ 0.07
CPNE1-204ENST00000397443 IGKV3D-20A0A0C4DH25 116 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 ZNF324O75467 553 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-204ENST00000397443 HTN1P15515 57 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 TPPP3Q9BW30 176 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 SMCO4Q9NRQ5 59 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 DNHD1Q96M86 4753 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 IGHV3OR16-12A0A075B7B8 117 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 ANXA2RQ3ZCQ2 193 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 TMEM242Q9NWH2 141 aa15.51■□□□□ 0.07
CPNE1-204ENST00000397443 ZMAT5Q9UDW3 170 aaKnown RBP15.51■□□□□ 0.07
CPNE1-204ENST00000397443 INSP01308 110 aa15.5■□□□□ 0.07
CPNE1-204ENST00000397443 IGHV4-30-4P0DP06 118 aa15.5■□□□□ 0.07
CPNE1-204ENST00000397443 IL36BQ9NZH7 164 aa15.5■□□□□ 0.07
CPNE1-204ENST00000397443 GIG44P09565 113 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms