RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CREBL2O60519 120 aaPredicted RBP-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 SMC2O95347 1197 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 FAM107AO95990 144 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 CXorf1O96002 111 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 CA1P00915 261 aaPredicted RBP-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 LGALS1P09382 135 aaKnown RBP-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 MX1P20591 662 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 RFC4P35249 363 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 RFC2P35250 354 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 ACTR1BP42025 376 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 SERPINB10P48595 397 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 CDC34P49427 236 aaPredicted RBP-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 GMFBP60983 142 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 BFSP1Q12934 665 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 STK4Q13043 487 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 STK38Q15208 465 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 MIAQ16674 131 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 CHCHD2P9Q5T1J5 151 aaPredicted RBP-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 TMEM170BQ5T4T1 132 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 CASC1Q6TDU7 716 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 ZNF826PQ6ZT77 177 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 GALNTL5Q7Z4T8 443 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 IQCA1Q86XH1 822 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 ORMDL3Q8N138 153 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR2D3Q8NGH3 330 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR1J4Q8NGS1 313 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR10T2Q8NGX3 314 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 CTNNBL1Q8WYA6 563 aaPredicted RBP-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 FER1L6-AS2Q96M78 137 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 NIPSNAP3BQ9BS92 247 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 TCHPQ9BT92 498 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 C20orf24Q9BUV8 137 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 PRO1933Q9H354 126 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 RNF122Q9H9V4 155 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 FAIMQ9NVQ4 179 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 FBXL12Q9NXK8 326 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 IFNKQ9P0W0 207 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 AASSQ9UDR5 926 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 NPATQ14207 1427 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 C5P01031 1676 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 MYH8P13535 1937 aa-2.19□□□□□ -2.76
RNU6-540P-201ENST00000384622 N4BP2Q86UW6 1770 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 MYH2Q9UKX2 1941 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 A0A096LPI6 279 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 LOC100506127A0A0U1RQW1 187 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 C8orf87E5RJ46 101 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 LINC01619G3V211 115 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 ZNF593O00488 134 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 GOSR1O95249 250 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 APOMO95445 188 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 GYPBP06028 91 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 COX5BP10606 129 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 SAT1P21673 171 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 CRHBPP24387 322 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 CXCR1P25024 350 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 CD24P25063 80 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 STOMP27105 288 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 PRDX6P30041 224 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 FCER1GP30273 86 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR10J1P30954 320 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 SDC4P31431 198 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 MDH1P40925 334 aaKnown RBP-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 DAD1P61803 113 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 RHOBP62745 196 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRAM1Q15629 374 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 ORMDL2Q53FV1 153 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 ANKRD20A8PQ5CZ79 823 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 FAM27BQ5VT28 67 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 CLEC2AQ6UVW9 174 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 Q6ZN92 141 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 SLC7A5P1Q8MH63 180 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 GPATCH11Q8N954 259 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR10AG1Q8NH19 301 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR51A7Q8NH64 312 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 LRRC20Q8TCA0 184 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 THEM6Q8WUY1 208 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 Q96MT0 163 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 XPO4Q9C0E2 1151 aaKnown RBP-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 DPH5Q9H2P9 285 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 XAGE1AQ9HD64 81 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 AKAP7Q9P0M2 348 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 ABRACLQ9P1F3 81 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 ISY1Q9ULR0 285 aaKnown RBP-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 RIC1Q4ADV7 1423 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 UNC13AQ9UPW8 1703 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 ABCA9Q8IUA7 1624 aa-2.2□□□□□ -2.76
RNU6-540P-201ENST00000384622 CCDC7Q96M83 1385 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRAV26-1A0A087WT03 109 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 IGHV2-26A0A0B4J1V2 119 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 TRBV10-2A0A0K0K1G8 114 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 NDUFC2-KCTD14E9PQ53 114 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 J3QRK9 145 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 UBE2L6O14933 153 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 GMFGO60234 142 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 STARD3NLO95772 234 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 CST4P01036 141 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 IGKCP01834 107 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 APOC1P02654 83 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 IVLP07476 585 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 SCTP09683 121 aa-2.21□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms