RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CXCL1P09341 107 aa5.65□□□□□ -1.51
CCDC171-201ENST00000380701 CTSZQ9UBR2 303 aa5.65□□□□□ -1.51
CCDC171-201ENST00000380701 IGHV3-64A0A075B6Q5 118 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 IGHG2P01859 326 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 PRR20EP86478 221 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 PRR20CP86479 221 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 PRR20DP86480 221 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 PRR20BP86481 221 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 PRR20AP86496 221 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 SIGLEC8Q9NYZ4 499 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 IGKV2D-24A0A075B6R9 120 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 LGALS9BQ3B8N2 356 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 LGALS9CQ6DKI2 356 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 MRPL36Q9P0J6 103 aaKnown RBP5.64□□□□□ -1.51
CCDC171-201ENST00000380701 KIAA1671Q9BY89 1806 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 SPTBN1Q01082 2364 aaKnown RBP5.64□□□□□ -1.51
CCDC171-201ENST00000380701 ARHGEF17Q96PE2 2063 aaPredicted RBP5.64□□□□□ -1.51
CCDC171-201ENST00000380701 CD5LO43866 347 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 NDUFA12Q9UI09 145 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 SMIM9A6NGZ8 99 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 IFITM1P13164 125 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 ATP6V0E2Q8NHE4 81 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 IGLV11-55A0A075B6I3 123 aa5.64□□□□□ -1.51
CCDC171-201ENST00000380701 SPANXCQ9NY87 97 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 IGHV7-81A0A0B4J1V7 117 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 PRSS47A8MTI9 375 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 GAGE2BQ13066 116 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 Q6ZVH6 145 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 SLC25A29Q8N8R3 303 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 U3KQE9 123 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 F8VRH5 84 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 IGFL4Q6B9Z1 124 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 CRYGCP07315 174 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 KIF26BQ2KJY2 2108 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 BVES-AS1Q5T3Y7 98 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 AJUBAQ96IF1 538 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 C5orf56Q8N8D9 126 aa5.63□□□□□ -1.51
CCDC171-201ENST00000380701 LTAP01374 205 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 C3orf79P0CE67 100 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 FXYD5Q96DB9 178 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 SMIM27A0A1W2PRY6 76 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 COLCA2A8K830 154 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 K7EQD1 137 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 MLANAQ16655 118 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 RSPO1Q2MKA7 263 aaPredicted RBP5.62□□□□□ -1.51
CCDC171-201ENST00000380701 ARTNQ5T4W7 220 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 C11orf53Q8IXP5 236 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 RLFQ13129 1914 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 COL6A6A6NMZ7 2263 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 WT1P19544 449 aaPredicted RBP5.62□□□□□ -1.51
CCDC171-201ENST00000380701 LURAP1LQ8IV03 231 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 ZNF503Q96F45 646 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 PLXNA4Q9HCM2 1894 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 ZNF503-AS2A6NEH8 195 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 C8orf49Q96NF6 230 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 NOP10Q9NPE3 64 aaKnown RBP5.62□□□□□ -1.51
CCDC171-201ENST00000380701 CACNA1DQ01668 2161 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 MRPL51Q4U2R6 128 aaKnown RBP5.62□□□□□ -1.51
CCDC171-201ENST00000380701 GBF1Q92538 1859 aa5.62□□□□□ -1.51
CCDC171-201ENST00000380701 C9JQL5 133 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 CCL25O15444 150 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 CFHR3Q02985 330 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 Q71RC1 249 aaPredicted RBP5.61□□□□□ -1.51
CCDC171-201ENST00000380701 SCN8AQ9UQD0 1980 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 IGKV1OR2-108A0A075B7D4 117 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 TRBV10-1A0A0K0K1A3 114 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 SIGMAR1Q99720 223 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 SCRT2Q9NQ03 307 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 VWA8A3KMH1 1905 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 TICRRQ7Z2Z1 1910 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 IGKV1-39P01597 117 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 IGKV1D-39P04432 117 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 SIRPDQ9H106 197 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 SIVA1O15304 175 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 ODF3Q96PU9 254 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 AGPAT4-IT1Q9H0P7 198 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 MYO7BQ6PIF6 2116 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 IGHV3-16A0A0C4DH30 117 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 A6NDX4 124 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 C2orf70A6NJV1 201 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 TIRAPP58753 221 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 GSN-AS1Q9NRJ2 163 aa5.61□□□□□ -1.51
CCDC171-201ENST00000380701 TMEM213A2RRL7 107 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 IGHV4-38-2P0DP08 117 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 Q8N9W7 124 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 TRBV6-1A0A0K0K1D8 114 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 I3L2K1 104 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 COX7A2LO14548 114 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 C18orf32Q8TCD1 76 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 CAMK2N2Q96S95 79 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 PRO3102Q9H379 93 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 FREM3P0C091 2139 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 ALPK2Q86TB3 2170 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 H0YGX0 51 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 NDUFA1O15239 70 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms