RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 DTX2Q86UW9 622 aa6.63□□□□□ -1.35
NHLRC3-201ENST00000379599 EEF1AKMT3Q96AZ1 226 aa6.63□□□□□ -1.35
NHLRC3-201ENST00000379599 FAM19A4Q96LR4 140 aa6.63□□□□□ -1.35
NHLRC3-201ENST00000379599 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
NHLRC3-201ENST00000379599 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
NHLRC3-201ENST00000379599 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
NHLRC3-201ENST00000379599 UPK2O00526 184 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 GP9P14770 177 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 MRPL14Q6P1L8 145 aaKnown RBP6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 Q6ZS46 218 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 PRR14LQ5THK1 2151 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 MRPL33O75394 65 aaKnown RBP6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 IGHV3-33P01772 117 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 LINC00336Q6ZUF6 198 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 NFAM1Q8NET5 270 aaPredicted RBP6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 NBEAQ8NFP9 2946 aa6.62□□□□□ -1.35
NHLRC3-201ENST00000379599 IGKV1D-37A0A075B6S9 117 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 A0A0J9YY99 117 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 A0A1W2PR77 199 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 ZNF503-AS2A6NEH8 195 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 SH2D1AO60880 128 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 COX6A1P12074 109 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 TMEM258P61165 79 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 LYZP61626 148 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 PRR25Q96S07 402 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 CEP192Q8TEP8 1941 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 KLRB1Q12918 225 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 IL17RELQ6ZVW7 336 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 MUC22E2RYF6 1773 aaPredicted RBP6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 ASXL3Q9C0F0 2248 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 RS1O15537 224 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 IGHV3-30P01768 117 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 CRYGDP07320 174 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 IGHV3-30-5P0DP03 117 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 PFN2P35080 140 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 RNF185Q96GF1 192 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 METTL26Q96S19 204 aa6.61□□□□□ -1.35
NHLRC3-201ENST00000379599 M0R3E3 92 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 LIFP15018 202 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 SUB1P53999 127 aaKnown RBP eCLIP6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 C17orf77Q96MU5 243 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 NAV3Q8IVL0 2385 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 A0A0U1RQV1 116 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 FAM240AA0A1B0GVK7 77 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 SPRY2O43597 315 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 IGKV1-16P04430 117 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 SAA2P0DJI9 122 aaPredicted RBP6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 C8orf31Q8N9H6 132 aa6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 MBD3L2Q8NHZ7 208 aaPredicted RBP6.6□□□□□ -1.35
NHLRC3-201ENST00000379599 TRAV26-2A0A0B4J265 109 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 H7C423 109 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 ATP5G1P05496 136 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 CRYGBP07316 175 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 CCL3P10147 92 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 RNF138Q8WVD3 245 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 WDFY4Q6ZS81 3184 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 P0DMU3 169 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 FAM231AP0DMU4 169 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 FAM231CP0DMU5 169 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 C10orf55Q5SWW7 151 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 URB1O60287 2271 aaKnown RBP6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 SAA1P0DJI8 122 aaPredicted RBP6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 APELAP0DMC3 54 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 TMEM75Q8N9X5 138 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 SPANXDQ9BXN6 97 aa6.59□□□□□ -1.35
NHLRC3-201ENST00000379599 FRYLO94915 3013 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 LINC01565O15544 149 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 EGR2P11161 476 aaPredicted RBP6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 HCP5Q6MZN7 132 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 ZCCHC24Q8N2G6 241 aaKnown RBP6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 C2orf48Q96LS8 159 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 ATOX1O00244 68 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 ZNF71Q9NQZ8 489 aaPredicted RBP6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 SIT1Q9Y3P8 196 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 MUC3AQ02505 3323 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 E7EUB6 86 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 TRIAP1O43715 76 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 NXPH1P58417 271 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 PMS2CLQ68D20 193 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 WFDC11Q8NEX6 87 aa6.58□□□□□ -1.36
NHLRC3-201ENST00000379599 TRAV8-3A0A0A6YYJ7 113 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 A0A1W2PPC4 97 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 J3QQQ9 107 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 COX6B1P14854 86 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 C14orf178Q8N769 122 aaPredicted RBP6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 FAM27E3Q08E93 113 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 RHOHQ15669 191 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 RUSC1-AS1Q66K80 236 aa6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 RPS19BP1Q86WX3 136 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-201ENST00000379599 THAP8Q8NA92 274 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms