RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 NDUFA4O00483 81 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 EMP1P54849 157 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 VPREB3Q9UKI3 123 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 COX11Q9Y6N1 276 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 HCFC1P51610 2035 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 EIF4EBP1Q13541 118 aaPredicted RBP11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
SHROOM1-203ENST00000378679 ZNF414Q96IQ9 312 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 MAP1AP78559 2803 aaPredicted RBP11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 NCR2O95944 276 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 PPP1R17O96001 155 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 EVI2AP22794 236 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 CACNG7P62955 275 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 MTURNQ8N3F0 131 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 DEFB104AQ8WTQ1 72 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 PPBPP02775 128 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 SMIM12Q96EX1 92 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 H7C1H1 209 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 SLAQ13239 276 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 HIST1H4GQ99525 98 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
SHROOM1-203ENST00000378679 GAGE12BA1L429 117 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 CTSGP08311 255 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 IGLL1P15814 213 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 NHP2Q9NX24 153 aaKnown RBP11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 CCL25O15444 150 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 NDUFA3O95167 84 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 DEFB131AP59861 70 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 ARMS2P0C7Q2 107 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
SHROOM1-203ENST00000378679 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 FSTL3O95633 263 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 PSMB2P49721 201 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 DYNAPQ8N1N2 210 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 OR11H1Q8NG94 326 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 PRR25Q96S07 402 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 ELANEP08246 267 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 TCTEX1D4Q5JR98 221 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 ZNF843Q8N446 348 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 TMEM75Q8N9X5 138 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 OR1N2Q8NGR9 330 aa11.11□□□□□ -0.63
SHROOM1-203ENST00000378679 ZNF292O60281 2723 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 TRGV2A0A075B6R0 118 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 D6R8Y8 96 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 V9GYV3 84 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
SHROOM1-203ENST00000378679 CRYGCP07315 174 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 AMN1Q8IY45 258 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 SCGB3A1Q96QR1 104 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 KMT2EQ8IZD2 1858 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 FAM167A-AS1Q96KT0 104 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 VGLL1Q99990 258 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 ATP5LO75964 103 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
SHROOM1-203ENST00000378679 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 ODF3BA8MYP8 253 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 BCL6BQ8N143 479 aaPredicted RBP11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 A0A1B0GWB2 263 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 LINC01619G3V211 115 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 K7EN84 100 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 FOXC2Q99958 501 aa11.08□□□□□ -0.64
SHROOM1-203ENST00000378679 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 H3BUA1 57 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 IGHV7-4-1A0A0J9YVY3 117 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 UBE2L6O14933 153 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 HBDP02042 147 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 GP9P14770 177 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 CFHR4Q92496 578 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 ST20Q9HBF5 79 aa11.07□□□□□ -0.64
SHROOM1-203ENST00000378679 TMEM213A2RRL7 107 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 IGKV3OR2-268A0A0C4DH90 116 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 SYS1-DBNDD2H3BUS1 97 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms