RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 VAX2Q9UIW0 290 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
HSPG2-201ENST00000374673 TENM3Q9P273 2699 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 TRBV6-1A0A0K0K1D8 114 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 LOC102723971A0A1B0GUV8 181 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 RNASE4P34096 147 aaKnown RBP10.83□□□□□ -0.68
HSPG2-201ENST00000374673 TAS2R60P59551 318 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 UBE2G1P62253 170 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 TMEM183BQ1AE95 376 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 RRN3P1Q2M238 152 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 Q6AWC8 147 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 PRNTQ86SH4 94 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 Q86TA4 180 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 C11orf52Q96A22 123 aa10.83□□□□□ -0.68
HSPG2-201ENST00000374673 S100A9P06702 114 aaKnown RBP10.82□□□□□ -0.68
HSPG2-201ENST00000374673 C8orf49Q96NF6 230 aa10.82□□□□□ -0.68
HSPG2-201ENST00000374673 WWC2-AS2Q96NR7 200 aa10.82□□□□□ -0.68
HSPG2-201ENST00000374673 PYGO2Q9BRQ0 406 aa10.82□□□□□ -0.68
HSPG2-201ENST00000374673 LINC00467Q9BRT7 94 aa10.82□□□□□ -0.68
HSPG2-201ENST00000374673 TMEM189A5PLL7 270 aa10.81□□□□□ -0.68
HSPG2-201ENST00000374673 ZNF705GA8MUZ8 300 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-201ENST00000374673 PDE6DO43924 150 aa10.81□□□□□ -0.68
HSPG2-201ENST00000374673 ZFP30Q9Y2G7 519 aa10.81□□□□□ -0.68
HSPG2-201ENST00000374673 NBEAL2Q6ZNJ1 2754 aa10.81□□□□□ -0.68
HSPG2-201ENST00000374673 RBFOX3A6NFN3 312 aa10.8□□□□□ -0.68
HSPG2-201ENST00000374673 DEFB4AO15263 64 aa10.8□□□□□ -0.68
HSPG2-201ENST00000374673 LTAP01374 205 aa10.8□□□□□ -0.68
HSPG2-201ENST00000374673 SMUG1Q53HV7 270 aa10.8□□□□□ -0.68
HSPG2-201ENST00000374673 ZNF506Q5JVG8 444 aa10.8□□□□□ -0.68
HSPG2-201ENST00000374673 PCNPQ8WW12 178 aaKnown RBP10.8□□□□□ -0.68
HSPG2-201ENST00000374673 FAM210AQ96ND0 272 aa10.8□□□□□ -0.68
HSPG2-201ENST00000374673 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 PRM2P04554 102 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 AZU1P20160 251 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 Q6ZQT7 251 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 ZNF493Q6ZR52 646 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 ZNF767PQ75MW2 155 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 COX8CQ7Z4L0 72 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 TMEM263Q8WUH6 116 aaKnown RBP10.79□□□□□ -0.68
HSPG2-201ENST00000374673 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
HSPG2-201ENST00000374673 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 RGS13O14921 159 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 NDUFS6O75380 124 aaKnown RBP10.78□□□□□ -0.68
HSPG2-201ENST00000374673 GCGP01275 180 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 HTN1P15515 57 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
HSPG2-201ENST00000374673 IFITM2Q01629 132 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 ANXA2RQ3ZCQ2 193 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 TOR2AQ5JU69 321 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
HSPG2-201ENST00000374673 RNASE8Q8TDE3 154 aaKnown RBP10.78□□□□□ -0.68
HSPG2-201ENST00000374673 TGP01266 2768 aa10.78□□□□□ -0.68
HSPG2-201ENST00000374673 PLAC8L1A1L4L8 177 aa10.77□□□□□ -0.69
HSPG2-201ENST00000374673 PFN1P07737 140 aaKnown RBP10.77□□□□□ -0.69
HSPG2-201ENST00000374673 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.69
HSPG2-201ENST00000374673 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
HSPG2-201ENST00000374673 IL17DQ8TAD2 202 aa10.77□□□□□ -0.69
HSPG2-201ENST00000374673 DERL1Q9BUN8 251 aa10.77□□□□□ -0.69
HSPG2-201ENST00000374673 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
HSPG2-201ENST00000374673 TMEM250H0YL14 139 aa10.76□□□□□ -0.69
HSPG2-201ENST00000374673 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
HSPG2-201ENST00000374673 FAM159AQ6UWV7 190 aa10.76□□□□□ -0.69
HSPG2-201ENST00000374673 BAGE2Q86Y30 109 aa10.76□□□□□ -0.69
HSPG2-201ENST00000374673 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
HSPG2-201ENST00000374673 MLST8Q9BVC4 326 aa10.76□□□□□ -0.69
HSPG2-201ENST00000374673 EIF5A2Q9GZV4 153 aaKnown RBP10.76□□□□□ -0.69
HSPG2-201ENST00000374673 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 CBY3A6NI87 242 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 EMP1P54849 157 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 RAB14P61106 215 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 IBA57Q5T440 356 aaKnown RBP10.75□□□□□ -0.69
HSPG2-201ENST00000374673 C11orf45Q8TAV5 145 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 DKK2Q9UBU2 259 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 CELA1Q9UNI1 258 aa10.75□□□□□ -0.69
HSPG2-201ENST00000374673 CXorf65A6NEN9 183 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 SPART-AS1P0CW21 52 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 CLLU1Q5K131 121 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 FAM222AQ5U5X8 452 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 C11orf72Q8NBR9 251 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 SMIM12Q96EX1 92 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 KCNS1Q96KK3 526 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 TP53TG3Q9ULZ0 132 aa10.74□□□□□ -0.69
HSPG2-201ENST00000374673 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 RAB19A4D1S5 217 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 LYRM9A8MSI8 78 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 SNURFLB1AK76 121 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 CRIP1P50238 77 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 ZNF674Q2M3X9 581 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 CENPWQ5EE01 88 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 NHLRC2Q8NBF2 726 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 MUC7Q8TAX7 377 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 PARLQ9H300 379 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 C11orf21Q9P2W6 132 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 NAGKQ9UJ70 344 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 873.5 ms