RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 TCF21O43680 179 aa16.83■□□□□ 0.28
CNN3-201ENST00000370206 SMAD7O15105 426 aaKnown RBP16.82■□□□□ 0.28
CNN3-201ENST00000370206 MAP1LC3AQ9H492 121 aa16.82■□□□□ 0.28
CNN3-201ENST00000370206 C20orf173Q96LM9 149 aa16.81■□□□□ 0.28
CNN3-201ENST00000370206 GOLT1BQ9Y3E0 138 aa16.81■□□□□ 0.28
CNN3-201ENST00000370206 LINC01546A6NGU7 62 aa16.81■□□□□ 0.28
CNN3-201ENST00000370206 GPHB5Q86YW7 130 aa16.81■□□□□ 0.28
CNN3-201ENST00000370206 NPFFR1Q9GZQ6 430 aa16.81■□□□□ 0.28
CNN3-201ENST00000370206 SPTAN1Q13813 2472 aaKnown RBP16.81■□□□□ 0.28
CNN3-201ENST00000370206 IGHV7-4-1A0A0J9YVY3 117 aa16.8■□□□□ 0.28
CNN3-201ENST00000370206 NPSP0C0P6 89 aa16.8■□□□□ 0.28
CNN3-201ENST00000370206 FOXE3Q13461 319 aa16.8■□□□□ 0.28
CNN3-201ENST00000370206 LGALS9BQ3B8N2 356 aa16.8■□□□□ 0.28
CNN3-201ENST00000370206 LGALS9CQ6DKI2 356 aa16.8■□□□□ 0.28
CNN3-201ENST00000370206 LENEPQ9Y5L5 61 aa16.8■□□□□ 0.28
CNN3-201ENST00000370206 FXYD7P58549 80 aa16.79■□□□□ 0.28
CNN3-201ENST00000370206 ZNF124Q15973 351 aa16.79■□□□□ 0.28
CNN3-201ENST00000370206 ZNF738Q8NE65 137 aa16.79■□□□□ 0.28
CNN3-201ENST00000370206 GAS8-AS1O95177 125 aa16.79■□□□□ 0.28
CNN3-201ENST00000370206 BLCAPP62952 87 aa16.79■□□□□ 0.28
CNN3-201ENST00000370206 KLK15Q9H2R5 256 aa16.79■□□□□ 0.28
CNN3-201ENST00000370206 TMEM8BA6NDV4 472 aa16.78■□□□□ 0.28
CNN3-201ENST00000370206 SOCS3O14543 225 aa16.78■□□□□ 0.28
CNN3-201ENST00000370206 TNFRSF6BO95407 300 aa16.78■□□□□ 0.28
CNN3-201ENST00000370206 IGHV3-11P01762 117 aa16.78■□□□□ 0.28
CNN3-201ENST00000370206 PF4V1P10720 104 aa16.78■□□□□ 0.28
CNN3-201ENST00000370206 IFI27L1Q96BM0 104 aa16.78■□□□□ 0.28
CNN3-201ENST00000370206 Q6ZS46 218 aa16.77■□□□□ 0.28
CNN3-201ENST00000370206 DPF1Q92782 380 aa16.77■□□□□ 0.28
CNN3-201ENST00000370206 NXT2Q9NPJ8 142 aaKnown RBP16.77■□□□□ 0.28
CNN3-201ENST00000370206 COX8AP10176 69 aa16.77■□□□□ 0.27
CNN3-201ENST00000370206 PRR9Q5T870 116 aa16.77■□□□□ 0.27
CNN3-201ENST00000370206 Q6ZQT7 251 aa16.77■□□□□ 0.27
CNN3-201ENST00000370206 OR4X2Q8NGF9 303 aa16.77■□□□□ 0.27
CNN3-201ENST00000370206 B4DSR2 109 aa16.76■□□□□ 0.27
CNN3-201ENST00000370206 SNAI2O43623 268 aa16.76■□□□□ 0.27
CNN3-201ENST00000370206 IGLV1-40P01703 118 aa16.76■□□□□ 0.27
CNN3-201ENST00000370206 MPV17L2Q567V2 206 aa16.76■□□□□ 0.27
CNN3-201ENST00000370206 ORAOV1Q8WV07 137 aa16.76■□□□□ 0.27
CNN3-201ENST00000370206 LINC00477Q96M19 166 aa16.76■□□□□ 0.27
CNN3-201ENST00000370206 IGHV4-4A0A075B6R2 117 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 OVOL1O14753 267 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 CACNG7P62955 275 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 SPOCK3Q9BQ16 436 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 CACNA1AO00555 2505 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 AVPP01185 164 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 EVI2AP22794 236 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 PIEZO1Q92508 2521 aa16.75■□□□□ 0.27
CNN3-201ENST00000370206 SMIM15Q7Z3B0 74 aa16.74■□□□□ 0.27
CNN3-201ENST00000370206 OR10J6PQ8NGY7 276 aa16.74■□□□□ 0.27
CNN3-201ENST00000370206 A0A0G2JLM5 398 aa16.74■□□□□ 0.27
CNN3-201ENST00000370206 GATA1P15976 413 aaPredicted RBP16.74■□□□□ 0.27
CNN3-201ENST00000370206 ZFAND2AQ8N6M9 145 aa16.74■□□□□ 0.27
CNN3-201ENST00000370206 COX11Q9Y6N1 276 aa16.74■□□□□ 0.27
CNN3-201ENST00000370206 DOPEY1Q5JWR5 2465 aa16.73■□□□□ 0.27
CNN3-201ENST00000370206 NUDT3O95989 172 aa16.73■□□□□ 0.27
CNN3-201ENST00000370206 DSCR9P59020 149 aa16.73■□□□□ 0.27
CNN3-201ENST00000370206 CFHR3Q02985 330 aa16.73■□□□□ 0.27
CNN3-201ENST00000370206 FCER1GP30273 86 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 BVES-AS1Q5T3Y7 98 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 LCNL1Q6ZST4 164 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 GATA3P23771 443 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 ANKRD39Q53RE8 183 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 C12orf54Q6X4T0 127 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 OR1N2Q8NGR9 330 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 OR2K2Q8NGT1 345 aa16.72■□□□□ 0.27
CNN3-201ENST00000370206 LEPP41159 167 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 SPANXN1Q5VSR9 72 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 Q8N8P6 123 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 IGLV2-18A0A075B6J9 118 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 H3BVH4 76 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 Q6ZVH6 145 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 ZNF580Q9UK33 172 aa16.71■□□□□ 0.27
CNN3-201ENST00000370206 C2orf91Q6ZV80 131 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 RHPN1-AS1Q9BWJ2 59 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 UFC1Q9Y3C8 167 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 CFAP46Q8IYW2 2715 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 PRSS47A8MTI9 375 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 FGF6P10767 208 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 DEFB125Q8N687 156 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 NRACQ8N912 160 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 FAM19A4Q96LR4 140 aa16.7■□□□□ 0.26
CNN3-201ENST00000370206 TRAV21A0A0B4J279 112 aa16.69■□□□□ 0.26
CNN3-201ENST00000370206 RPL11P62913 178 aaKnown RBP16.69■□□□□ 0.26
CNN3-201ENST00000370206 TM4SF20Q53R12 229 aa16.69■□□□□ 0.26
CNN3-201ENST00000370206 WFDC3Q8IUB2 231 aa16.69■□□□□ 0.26
CNN3-201ENST00000370206 DAZ1Q9NQZ3 744 aaKnown RBP16.69■□□□□ 0.26
CNN3-201ENST00000370206 J3KRW8 73 aa16.68■□□□□ 0.26
CNN3-201ENST00000370206 DEFB1P60022 68 aa16.68■□□□□ 0.26
CNN3-201ENST00000370206 NRGNQ92686 78 aa16.68■□□□□ 0.26
CNN3-201ENST00000370206 SPG11Q96JI7 2443 aa16.68■□□□□ 0.26
CNN3-201ENST00000370206 SLC25A16P16260 332 aa16.68■□□□□ 0.26
CNN3-201ENST00000370206 C18orf15Q96N68 181 aa16.68■□□□□ 0.26
CNN3-201ENST00000370206 COL12A1Q99715 3063 aa16.67■□□□□ 0.26
CNN3-201ENST00000370206 TRAV26-2A0A0B4J265 109 aa16.67■□□□□ 0.26
CNN3-201ENST00000370206 SMPXQ9UHP9 88 aa16.67■□□□□ 0.26
CNN3-201ENST00000370206 APRG1Q8IVJ8 170 aa16.66■□□□□ 0.26
CNN3-201ENST00000370206 TMEM158Q8WZ71 300 aa16.66■□□□□ 0.26
CNN3-201ENST00000370206 DKK2Q9UBU2 259 aa16.66■□□□□ 0.26
CNN3-201ENST00000370206 PEF1Q9UBV8 284 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms