RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 TRGV3P03979 118 aa14.04□□□□□ -0.16
PTPA-206ENST00000358994 LGALS1P09382 135 aaKnown RBP14.04□□□□□ -0.16
PTPA-206ENST00000358994 PSMB2P49721 201 aa14.04□□□□□ -0.16
PTPA-206ENST00000358994 TCF15Q12870 199 aa14.04□□□□□ -0.16
PTPA-206ENST00000358994 TMEM178BH3BS89 294 aa14.03□□□□□ -0.16
PTPA-206ENST00000358994 TRAV26-2A0A0B4J265 109 aa14.03□□□□□ -0.16
PTPA-206ENST00000358994 MBD3L4A6NDZ8 208 aaPredicted RBP14.03□□□□□ -0.16
PTPA-206ENST00000358994 MBD3L3A6NE82 208 aaPredicted RBP14.03□□□□□ -0.16
PTPA-206ENST00000358994 MBD3L5A6NJ08 208 aaPredicted RBP14.03□□□□□ -0.16
PTPA-206ENST00000358994 NRACQ8N912 160 aa14.03□□□□□ -0.16
PTPA-206ENST00000358994 MBD3L2Q8NHZ7 208 aaPredicted RBP14.03□□□□□ -0.16
PTPA-206ENST00000358994 CCL17Q92583 94 aa14.03□□□□□ -0.16
PTPA-206ENST00000358994 SS18L2Q9UHA2 77 aa14.03□□□□□ -0.16
PTPA-206ENST00000358994 C17orf100A8MU93 164 aa14.02□□□□□ -0.16
PTPA-206ENST00000358994 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.16
PTPA-206ENST00000358994 GFRALQ6UXV0 394 aa14.02□□□□□ -0.16
PTPA-206ENST00000358994 PKDREJQ9NTG1 2253 aa14.02□□□□□ -0.17
PTPA-206ENST00000358994 F8VRH5 84 aa14.02□□□□□ -0.17
PTPA-206ENST00000358994 CNIH1O95406 144 aa14.02□□□□□ -0.17
PTPA-206ENST00000358994 LOC107984156A0A0G2JMH3 177 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 ARL17AQ8IVW1 177 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 ZGRF1Q86YA3 2104 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 PRSS29PA6NIE9 313 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 H7C1H1 209 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 IGLV1-47P01700 117 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 PPDPFLQ8WWR9 84 aa14.01□□□□□ -0.17
PTPA-206ENST00000358994 BOD1L1Q8NFC6 3051 aa14□□□□□ -0.17
PTPA-206ENST00000358994 ERCC8Q13216 396 aa14□□□□□ -0.17
PTPA-206ENST00000358994 SMAD5-AS1Q9Y6J3 95 aa14□□□□□ -0.17
PTPA-206ENST00000358994 UBE2D1P51668 147 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 UBE2D3P61077 147 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 UBE2D2P62837 147 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 FAM27E3Q08E93 113 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 TMEM78Q5T7P6 136 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 TEN1Q86WV5 123 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 CFHR4Q92496 578 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 ANAPC13Q9BS18 74 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 RP1L1Q8IWN7 2480 aaPredicted RBP13.99□□□□□ -0.17
PTPA-206ENST00000358994 TRAV12-1A0A0B4J245 112 aa13.99□□□□□ -0.17
PTPA-206ENST00000358994 ZNF672Q499Z4 452 aaPredicted RBP13.99□□□□□ -0.17
PTPA-206ENST00000358994 BUB1B-PAK6H3BSN5 160 aa13.98□□□□□ -0.17
PTPA-206ENST00000358994 RPL7P18124 248 aaKnown RBP13.98□□□□□ -0.17
PTPA-206ENST00000358994 DYNAPQ8N1N2 210 aa13.98□□□□□ -0.17
PTPA-206ENST00000358994 IGKV3D-20A0A0C4DH25 116 aa13.98□□□□□ -0.17
PTPA-206ENST00000358994 SRSF8Q9BRL6 282 aaKnown RBP13.98□□□□□ -0.17
PTPA-206ENST00000358994 RAB1BQ9H0U4 201 aa13.98□□□□□ -0.17
PTPA-206ENST00000358994 ADIPOQQ15848 244 aa13.98□□□□□ -0.17
PTPA-206ENST00000358994 IL17RELQ6ZVW7 336 aa13.98□□□□□ -0.17
PTPA-206ENST00000358994 CSMD1Q96PZ7 3565 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 F8W735 103 aaPredicted RBP13.97□□□□□ -0.17
PTPA-206ENST00000358994 PLEKHB2Q96CS7 222 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 C11orf21Q9P2W6 132 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 RAXQ9Y2V3 346 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 TRAV17A0A0B4J275 112 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 PRAC2D3DTV9 90 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 NUP37Q8NFH4 326 aa13.97□□□□□ -0.17
PTPA-206ENST00000358994 A6NJY4 79 aa13.96□□□□□ -0.17
PTPA-206ENST00000358994 PRADC1Q9BSG0 188 aa13.96□□□□□ -0.17
PTPA-206ENST00000358994 KLK15Q9H2R5 256 aa13.96□□□□□ -0.17
PTPA-206ENST00000358994 ASCL5Q7RTU5 278 aa13.96□□□□□ -0.18
PTPA-206ENST00000358994 KIR2DL4Q99706 377 aa13.96□□□□□ -0.18
PTPA-206ENST00000358994 ARRDC1-AS1Q9H2J1 176 aa13.96□□□□□ -0.18
PTPA-206ENST00000358994 UFC1Q9Y3C8 167 aa13.96□□□□□ -0.18
PTPA-206ENST00000358994 FAM215AQ9Y5M1 114 aa13.96□□□□□ -0.18
PTPA-206ENST00000358994 TCL1BO95988 128 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 CD7P09564 240 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 GAGE5Q13069 117 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 GAGE6Q13070 117 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 TPRP12270 2363 aaKnown RBP13.95□□□□□ -0.18
PTPA-206ENST00000358994 ZNF815PA8K554 130 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 NEXN-AS1Q8NBZ9 246 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
PTPA-206ENST00000358994 ZNF688P0C7X2 276 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 ZNF883P0CG24 379 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 MFAP4P55083 255 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 SRSF9Q13242 221 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTPA-206ENST00000358994 RALYQ9UKM9 306 aaKnown RBP13.94□□□□□ -0.18
PTPA-206ENST00000358994 TACC2O95359 2948 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 FAM90A27PA6NNH2 459 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 IGHV3-23P01764 117 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 COX7A1P24310 79 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 ZFAND6Q6FIF0 208 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 SBSPONQ8IVN8 264 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 SCGB3A1Q96QR1 104 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 KAAG1Q9UBP8 84 aa13.94□□□□□ -0.18
PTPA-206ENST00000358994 IGFL2Q6UWQ7 119 aa13.93□□□□□ -0.18
PTPA-206ENST00000358994 SCGB1D4Q6XE38 83 aa13.93□□□□□ -0.18
PTPA-206ENST00000358994 VKORC1Q9BQB6 163 aa13.93□□□□□ -0.18
PTPA-206ENST00000358994 IGHV7-4-1A0A0J9YVY3 117 aa13.93□□□□□ -0.18
PTPA-206ENST00000358994 B5MCH6 92 aa13.93□□□□□ -0.18
PTPA-206ENST00000358994 NHLRC4P0CG21 123 aaPredicted RBP13.93□□□□□ -0.18
PTPA-206ENST00000358994 VCX2Q9H322 139 aa13.93□□□□□ -0.18
PTPA-206ENST00000358994 IGHV3OR16-8A0A075B7F1 116 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 COX6B1P14854 86 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 SLC25A16P16260 332 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 SMIM2Q9BVW6 85 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 IGLV11-55A0A075B6I3 123 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 NDUFA11Q86Y39 141 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 ANKRD29Q8N6D5 301 aa13.92□□□□□ -0.18
PTPA-206ENST00000358994 TEX29Q8N6K0 151 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms