RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 CCL17Q92583 94 aa11.18□□□□□ -0.62
APP-205ENST00000358918 IGLV2-18A0A075B6J9 118 aa11.18□□□□□ -0.62
APP-205ENST00000358918 HOXA3O43365 443 aaPredicted RBP11.18□□□□□ -0.62
APP-205ENST00000358918 NDUFA3O95167 84 aa11.18□□□□□ -0.62
APP-205ENST00000358918 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
APP-205ENST00000358918 LAGE3Q14657 143 aa11.18□□□□□ -0.62
APP-205ENST00000358918 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
APP-205ENST00000358918 ROS1P08922 2347 aa11.17□□□□□ -0.62
APP-205ENST00000358918 ADIPOQQ15848 244 aa11.17□□□□□ -0.62
APP-205ENST00000358918 DTX2Q86UW9 622 aa11.17□□□□□ -0.62
APP-205ENST00000358918 DLX4Q92988 240 aaPredicted RBP11.17□□□□□ -0.62
APP-205ENST00000358918 TLN1Q9Y490 2541 aaKnown RBP11.17□□□□□ -0.62
APP-205ENST00000358918 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
APP-205ENST00000358918 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
APP-205ENST00000358918 OR11H12B2RN74 326 aa11.17□□□□□ -0.62
APP-205ENST00000358918 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
APP-205ENST00000358918 OR11H1Q8NG94 326 aa11.17□□□□□ -0.62
APP-205ENST00000358918 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
APP-205ENST00000358918 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
APP-205ENST00000358918 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
APP-205ENST00000358918 PLXNB1O43157 2135 aa11.16□□□□□ -0.62
APP-205ENST00000358918 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
APP-205ENST00000358918 CFAP126Q5VTH2 177 aa11.16□□□□□ -0.62
APP-205ENST00000358918 MORN3Q6PF18 240 aaPredicted RBP11.16□□□□□ -0.62
APP-205ENST00000358918 S4R3C0 116 aa11.16□□□□□ -0.62
APP-205ENST00000358918 IGF2RP11717 2491 aa11.16□□□□□ -0.62
APP-205ENST00000358918 ADGRG4Q8IZF6 3080 aa11.16□□□□□ -0.62
APP-205ENST00000358918 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
APP-205ENST00000358918 H7C1H1 209 aa11.14□□□□□ -0.63
APP-205ENST00000358918 MT-ATP8P03928 68 aa11.14□□□□□ -0.63
APP-205ENST00000358918 DLX1P56177 255 aa11.14□□□□□ -0.63
APP-205ENST00000358918 IGLV1-47P01700 117 aa11.14□□□□□ -0.63
APP-205ENST00000358918 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
APP-205ENST00000358918 PRB3Q04118 309 aaPredicted RBP11.14□□□□□ -0.63
APP-205ENST00000358918 LCNL1Q6ZST4 164 aa11.14□□□□□ -0.63
APP-205ENST00000358918 A6NJY4 79 aa11.13□□□□□ -0.63
APP-205ENST00000358918 F8VRH5 84 aa11.13□□□□□ -0.63
APP-205ENST00000358918 MFAP4P55083 255 aa11.13□□□□□ -0.63
APP-205ENST00000358918 Q6ZUT4 128 aa11.13□□□□□ -0.63
APP-205ENST00000358918 RNF5Q99942 180 aa11.13□□□□□ -0.63
APP-205ENST00000358918 VKORC1Q9BQB6 163 aa11.13□□□□□ -0.63
APP-205ENST00000358918 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
APP-205ENST00000358918 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
APP-205ENST00000358918 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
APP-205ENST00000358918 PSMG3-AS1Q96PY0 264 aa11.13□□□□□ -0.63
APP-205ENST00000358918 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
APP-205ENST00000358918 PSMB2P49721 201 aa11.12□□□□□ -0.63
APP-205ENST00000358918 EFNA4P52798 201 aa11.12□□□□□ -0.63
APP-205ENST00000358918 NRACQ8N912 160 aa11.12□□□□□ -0.63
APP-205ENST00000358918 SPTA1P02549 2419 aa11.12□□□□□ -0.63
APP-205ENST00000358918 TRGV3P03979 118 aa11.12□□□□□ -0.63
APP-205ENST00000358918 COX7A1P24310 79 aa11.12□□□□□ -0.63
APP-205ENST00000358918 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
APP-205ENST00000358918 UCNP55089 124 aa11.12□□□□□ -0.63
APP-205ENST00000358918 XGP55808 180 aa11.12□□□□□ -0.63
APP-205ENST00000358918 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
APP-205ENST00000358918 LYRM7Q5U5X0 104 aa11.11□□□□□ -0.63
APP-205ENST00000358918 GLMPQ8WWB7 406 aa11.11□□□□□ -0.63
APP-205ENST00000358918 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
APP-205ENST00000358918 VCX2Q9H322 139 aa11.11□□□□□ -0.63
APP-205ENST00000358918 ERG28Q9UKR5 140 aa11.11□□□□□ -0.63
APP-205ENST00000358918 PKDREJQ9NTG1 2253 aa11.11□□□□□ -0.63
APP-205ENST00000358918 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
APP-205ENST00000358918 LINC01549A6NIU2 74 aa11.11□□□□□ -0.63
APP-205ENST00000358918 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
APP-205ENST00000358918 TSPAN13O95857 204 aa11.11□□□□□ -0.63
APP-205ENST00000358918 ERCC8Q13216 396 aa11.11□□□□□ -0.63
APP-205ENST00000358918 FHL3Q13643 280 aa11.11□□□□□ -0.63
APP-205ENST00000358918 TMEM78Q5T7P6 136 aa11.11□□□□□ -0.63
APP-205ENST00000358918 IL17RELQ6ZVW7 336 aa11.11□□□□□ -0.63
APP-205ENST00000358918 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
APP-205ENST00000358918 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
APP-205ENST00000358918 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
APP-205ENST00000358918 IGHG4P01861 327 aa11.1□□□□□ -0.63
APP-205ENST00000358918 CFHR4Q92496 578 aa11.1□□□□□ -0.63
APP-205ENST00000358918 RELNP78509 3460 aa11.1□□□□□ -0.63
APP-205ENST00000358918 SPTBN4Q9H254 2564 aa11.1□□□□□ -0.63
APP-205ENST00000358918 E7EQL1 145 aa11.1□□□□□ -0.63
APP-205ENST00000358918 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
APP-205ENST00000358918 RNF183Q96D59 192 aa11.1□□□□□ -0.63
APP-205ENST00000358918 SMAD5-AS1Q9Y6J3 95 aa11.1□□□□□ -0.63
APP-205ENST00000358918 POLEQ07864 2286 aa11.09□□□□□ -0.63
APP-205ENST00000358918 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
APP-205ENST00000358918 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
APP-205ENST00000358918 TEN1Q86WV5 123 aa11.09□□□□□ -0.63
APP-205ENST00000358918 OR11H6Q8NGC7 330 aa11.09□□□□□ -0.63
APP-205ENST00000358918 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
APP-205ENST00000358918 C21orf62Q9NYP8 219 aa11.09□□□□□ -0.63
APP-205ENST00000358918 CCL21O00585 134 aa11.08□□□□□ -0.64
APP-205ENST00000358918 NBR2O15453 112 aa11.08□□□□□ -0.64
APP-205ENST00000358918 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
APP-205ENST00000358918 KLRB1Q12918 225 aa11.08□□□□□ -0.64
APP-205ENST00000358918 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
APP-205ENST00000358918 SCGB1D4Q6XE38 83 aa11.08□□□□□ -0.64
APP-205ENST00000358918 RNASE6Q93091 150 aaKnown RBP11.08□□□□□ -0.64
APP-205ENST00000358918 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
APP-205ENST00000358918 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
APP-205ENST00000358918 KALRNO60229 2985 aa11.08□□□□□ -0.64
APP-205ENST00000358918 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
APP-205ENST00000358918 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms