RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 RITA1Q96K30 269 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 ERG28Q9UKR5 140 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 HIVEP3Q5T1R4 2406 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
CNOT3-202ENST00000358389 A8MWV9 139 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 PPDPFLQ8WWR9 84 aa9.02□□□□□ -0.97
CNOT3-202ENST00000358389 CGB3P0DN86 165 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 CGB7P0DN87 165 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 CNTFRP26992 372 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 C1orf162Q8NEQ5 155 aaPredicted RBP9.01□□□□□ -0.97
CNOT3-202ENST00000358389 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 LY6DQ14210 128 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 C1orf122Q6ZSJ8 110 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 GAFA1Q96PS6 74 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 LINC00312Q9Y6C7 94 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 IGHV1-46P01743 117 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 ATP5J2P56134 94 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 DLX1P56177 255 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 MSMPQ1L6U9 139 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 DSCAMO60469 2012 aa9.01□□□□□ -0.97
CNOT3-202ENST00000358389 TRAV26-2A0A0B4J265 109 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 M0R381 172 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
CNOT3-202ENST00000358389 C3orf36Q3SXR2 165 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 SHISA2Q6UWI4 295 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 ZNF493Q6ZR52 646 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 NFE4Q86UQ8 179 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 DPM3Q9P2X0 92 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 PTPRBP23467 1997 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 TNRC6BQ9UPQ9 1833 aaKnown RBP9□□□□□ -0.97
CNOT3-202ENST00000358389 TECTAO75443 2155 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 LY6HO94772 140 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 DEFB104AQ8WTQ1 72 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 USP9XQ93008 2570 aaPredicted RBP9□□□□□ -0.97
CNOT3-202ENST00000358389 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9□□□□□ -0.97
CNOT3-202ENST00000358389 C5orf64Q2M2E5 130 aa9□□□□□ -0.97
CNOT3-202ENST00000358389 SPENQ96T58 3664 aaKnown RBP8.99□□□□□ -0.97
CNOT3-202ENST00000358389 FAM57AQ8TBR7 257 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 METTL26Q96S19 204 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 LINC00527Q9UJ94 153 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 PHLDA3Q9Y5J5 127 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 ZNF833PQ6ZTB9 187 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 SIGLEC15Q6ZMC9 328 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 RNF125Q96EQ8 232 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 TM4SF5O14894 197 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 HIVEP2P31629 2446 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 TAL2Q16559 108 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 SCGB3A1Q96QR1 104 aa8.99□□□□□ -0.97
CNOT3-202ENST00000358389 B9A039 149 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 PRSS2P07478 247 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 C21orf62Q9NYP8 219 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 ZNF688P0C7X2 276 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 SRSF1Q07955 248 aaKnown RBP eCLIP8.98□□□□□ -0.97
CNOT3-202ENST00000358389 BEX4Q9NWD9 120 aaPredicted RBP8.98□□□□□ -0.97
CNOT3-202ENST00000358389 PRO0461Q9UI25 63 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 LAGE3Q14657 143 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 CEP192Q8TEP8 1941 aa8.98□□□□□ -0.97
CNOT3-202ENST00000358389 IGHV3OR16-12A0A075B7B8 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 TRBV7-9A0A0J9YWB2 115 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 EMP1P54849 157 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 C3orf56Q8N813 242 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 OR10J6PQ8NGY7 276 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 SHANK2-AS3Q9BTD1 123 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE12JA6NER3 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE7O76087 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE12FP0CL80 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE12GP0CL81 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE12IP0CL82 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 GAGE4Q13068 117 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 CFAP126Q5VTH2 177 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 U3KQK5 164 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 NAV2Q8IVL1 2488 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 TMEM262E9PQX1 116 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 TSPAN13O95857 204 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 DTX2Q86UW9 622 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 TEN1Q86WV5 123 aa8.97□□□□□ -0.97
CNOT3-202ENST00000358389 LINC01548A6NM66 108 aa8.96□□□□□ -0.97
CNOT3-202ENST00000358389 TIMM23O14925 209 aa8.96□□□□□ -0.97
CNOT3-202ENST00000358389 TMEM200BQ69YZ2 307 aa8.96□□□□□ -0.97
CNOT3-202ENST00000358389 RNASE6Q93091 150 aaKnown RBP8.96□□□□□ -0.97
CNOT3-202ENST00000358389 TMEM14CQ9P0S9 112 aa8.96□□□□□ -0.97
CNOT3-202ENST00000358389 SHISA9B4DS77 424 aa8.96□□□□□ -0.98
CNOT3-202ENST00000358389 C9JAW5 83 aa8.96□□□□□ -0.98
CNOT3-202ENST00000358389 PLNP26678 52 aa8.96□□□□□ -0.98
CNOT3-202ENST00000358389 RAX2Q96IS3 184 aa8.96□□□□□ -0.98
CNOT3-202ENST00000358389 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.98
CNOT3-202ENST00000358389 SLC25A16P16260 332 aa8.96□□□□□ -0.98
CNOT3-202ENST00000358389 HLA-DMBP28068 263 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms