RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 C1orf158Q8N1D5 194 aa11.6□□□□□ -0.55
FDPS-201ENST00000356657 RETNQ9HD89 108 aa11.6□□□□□ -0.55
FDPS-201ENST00000356657 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 RGS13O14921 159 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 Q6AWC8 147 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 COX8CQ7Z4L0 72 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 Q86TA4 180 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 FAM210AQ96ND0 272 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 LINC00467Q9BRT7 94 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 X6R8D5 127 aa11.59□□□□□ -0.55
FDPS-201ENST00000356657 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
FDPS-201ENST00000356657 SCO2A0A1W2PP80 73 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 RRN3P1Q2M238 152 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 SMUG1Q53HV7 270 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 SMIM12Q96EX1 92 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
FDPS-201ENST00000356657 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 TRAV21A0A0B4J279 112 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 LTAP01374 205 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
FDPS-201ENST00000356657 ZNF493Q6ZR52 646 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 Q8NAQ8 132 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 LINC01587Q99440 93 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 TEX48A0A1B0GUV7 120 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 ZNF324O75467 553 aaPredicted RBP11.57□□□□□ -0.56
FDPS-201ENST00000356657 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
FDPS-201ENST00000356657 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
FDPS-201ENST00000356657 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 J3KRW8 73 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 RPL35P42766 123 aaKnown RBP11.56□□□□□ -0.56
FDPS-201ENST00000356657 BTN1A1Q13410 526 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 KIR3DS1Q14943 382 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 TMEM183AQ8IXX5 376 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 TMEM263Q8WUH6 116 aaKnown RBP11.56□□□□□ -0.56
FDPS-201ENST00000356657 TVP23CQ96ET8 276 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 C16orf74Q96GX8 76 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
FDPS-201ENST00000356657 IGHV4-28A0A0C4DH34 117 aa11.55□□□□□ -0.56
FDPS-201ENST00000356657 PFN1P07737 140 aaKnown RBP11.55□□□□□ -0.56
FDPS-201ENST00000356657 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
FDPS-201ENST00000356657 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
FDPS-201ENST00000356657 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
FDPS-201ENST00000356657 ANXA2RQ3ZCQ2 193 aa11.55□□□□□ -0.56
FDPS-201ENST00000356657 TOR2AQ5JU69 321 aa11.55□□□□□ -0.56
FDPS-201ENST00000356657 CLLU1Q5K131 121 aa11.55□□□□□ -0.56
FDPS-201ENST00000356657 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
FDPS-201ENST00000356657 GCGP01275 180 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 PRR9Q5T870 116 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 EIF4E3Q8N5X7 224 aaKnown RBP11.54□□□□□ -0.56
FDPS-201ENST00000356657 IL17DQ8TAD2 202 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 WWC2-AS2Q96NR7 200 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 EDA2RQ9HAV5 297 aa11.54□□□□□ -0.56
FDPS-201ENST00000356657 IGHV1OR15-1A0A075B7D0 117 aa11.53□□□□□ -0.56
FDPS-201ENST00000356657 FAM159AQ6UWV7 190 aa11.53□□□□□ -0.56
FDPS-201ENST00000356657 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
FDPS-201ENST00000356657 BIN3Q9NQY0 253 aa11.53□□□□□ -0.56
FDPS-201ENST00000356657 A0A0J9YWU9 116 aa11.52□□□□□ -0.56
FDPS-201ENST00000356657 FABP5P3A8MUU1 101 aa11.52□□□□□ -0.56
FDPS-201ENST00000356657 C9JCJ5 164 aa11.52□□□□□ -0.56
FDPS-201ENST00000356657 PEA15Q15121 130 aa11.52□□□□□ -0.56
FDPS-201ENST00000356657 IBA57Q5T440 356 aaKnown RBP11.52□□□□□ -0.56
FDPS-201ENST00000356657 RNASE8Q8TDE3 154 aaKnown RBP11.52□□□□□ -0.56
FDPS-201ENST00000356657 C8orf49Q96NF6 230 aa11.52□□□□□ -0.56
FDPS-201ENST00000356657 GNG4P50150 75 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 MLST8Q9BVC4 326 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 TRGV11A0A075B6L2 103 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 CBY3A6NI87 242 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 LYRM9A8MSI8 78 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
FDPS-201ENST00000356657 CENPWQ5EE01 88 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
FDPS-201ENST00000356657 RAB19A4D1S5 217 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 HTN1P15515 57 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 ZNF674Q2M3X9 581 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
FDPS-201ENST00000356657 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 PARLQ9H300 379 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 SDF2L1Q9HCN8 221 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 TP53TG3Q9ULZ0 132 aa11.5□□□□□ -0.57
FDPS-201ENST00000356657 TIMM8BQ9Y5J9 83 aaPredicted RBP11.5□□□□□ -0.57
FDPS-201ENST00000356657 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
FDPS-201ENST00000356657 SPART-AS1P0CW21 52 aa11.49□□□□□ -0.57
FDPS-201ENST00000356657 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
FDPS-201ENST00000356657 LY96Q9Y6Y9 160 aa11.49□□□□□ -0.57
FDPS-201ENST00000356657 ZNF80P51504 273 aaPredicted RBP11.48□□□□□ -0.57
FDPS-201ENST00000356657 ZNF415Q09FC8 603 aa11.48□□□□□ -0.57
FDPS-201ENST00000356657 DAZ2Q13117 558 aaKnown RBP11.48□□□□□ -0.57
FDPS-201ENST00000356657 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
FDPS-201ENST00000356657 TCL1AP56279 114 aa11.47□□□□□ -0.57
FDPS-201ENST00000356657 C11orf45Q8TAV5 145 aa11.47□□□□□ -0.57
FDPS-201ENST00000356657 SMIM7Q9BQ49 75 aa11.47□□□□□ -0.57
FDPS-201ENST00000356657 DKK2Q9UBU2 259 aa11.47□□□□□ -0.57
FDPS-201ENST00000356657 NAGKQ9UJ70 344 aa11.47□□□□□ -0.57
FDPS-201ENST00000356657 TRBV20OR9-2A0A075B6H5 130 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms