RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 CRLF1O75462 422 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 PGLYRP4Q96LB8 373 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 GZMBP10144 247 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 HOXA5P20719 270 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 SNRPD3P62318 126 aaKnown RBP17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 C11orf44Q8N8P7 122 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 FAM19A4Q96LR4 140 aa17.16■□□□□ 0.34
SCAMP3-202ENST00000355379 ZNF705DP0CH99 300 aaPredicted RBP17.15■□□□□ 0.34
SCAMP3-202ENST00000355379 ZNF705BP0CI00 300 aaPredicted RBP17.15■□□□□ 0.34
SCAMP3-202ENST00000355379 LINC01559Q495D7 138 aa17.14■□□□□ 0.33
SCAMP3-202ENST00000355379 HIST2H2BDQ6DRA6 164 aa17.14■□□□□ 0.33
SCAMP3-202ENST00000355379 A0A1W2PRX2 142 aa17.13■□□□□ 0.33
SCAMP3-202ENST00000355379 TFPI2P48307 235 aa17.13■□□□□ 0.33
SCAMP3-202ENST00000355379 HBBP68871 147 aa17.13■□□□□ 0.33
SCAMP3-202ENST00000355379 COA6Q5JTJ3 125 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-202ENST00000355379 CRISP2P16562 243 aa17.12■□□□□ 0.33
SCAMP3-202ENST00000355379 RAB4BP61018 213 aa17.12■□□□□ 0.33
SCAMP3-202ENST00000355379 APRG1Q8IVJ8 170 aa17.12■□□□□ 0.33
SCAMP3-202ENST00000355379 F6UB75 175 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 DEFB1P60022 68 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 ZFAND2AQ8N6M9 145 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 SIGLEC8Q9NYZ4 499 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 A0A1B0GUS0 222 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 A0A1B0GUT8 65 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 A0A1B0GW15 77 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 ORM1P02763 201 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 ZNF688P0C7X2 276 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 RIGQ13278 110 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 PSMG4Q5JS54 123 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 GDF5OSQ5U4N7 250 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 DYNLRB2Q8TF09 96 aa17.11■□□□□ 0.33
SCAMP3-202ENST00000355379 DEFB114Q30KQ6 69 aa17.1■□□□□ 0.33
SCAMP3-202ENST00000355379 GATD1Q8NB37 220 aa17.1■□□□□ 0.33
SCAMP3-202ENST00000355379 BORCS7Q96B45 105 aa17.1■□□□□ 0.33
SCAMP3-202ENST00000355379 ODF3Q96PU9 254 aa17.1■□□□□ 0.33
SCAMP3-202ENST00000355379 TMSB15BA0A087X1C1 80 aa17.09■□□□□ 0.33
SCAMP3-202ENST00000355379 ADARB2-AS1A8MUL3 147 aa17.09■□□□□ 0.33
SCAMP3-202ENST00000355379 APCSP02743 223 aa17.09■□□□□ 0.33
SCAMP3-202ENST00000355379 S100A8P05109 93 aa17.09■□□□□ 0.33
SCAMP3-202ENST00000355379 IGLC6P0CF74 106 aa17.09■□□□□ 0.33
SCAMP3-202ENST00000355379 ZNF575Q86XF7 245 aa17.09■□□□□ 0.33
SCAMP3-202ENST00000355379 NOTCH2Q04721 2471 aa17.08■□□□□ 0.33
SCAMP3-202ENST00000355379 TRAV25A0A0B4J276 109 aa17.08■□□□□ 0.32
SCAMP3-202ENST00000355379 A0A0J9YX75 114 aa17.08■□□□□ 0.32
SCAMP3-202ENST00000355379 CAMPP49913 170 aa17.08■□□□□ 0.32
SCAMP3-202ENST00000355379 MTORP42345 2549 aa17.07■□□□□ 0.32
SCAMP3-202ENST00000355379 CTRLP40313 264 aa17.07■□□□□ 0.32
SCAMP3-202ENST00000355379 PRR9Q5T870 116 aa17.07■□□□□ 0.32
SCAMP3-202ENST00000355379 CUBNO60494 3623 aa17.07■□□□□ 0.32
SCAMP3-202ENST00000355379 TRAV21A0A0B4J279 112 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 IGKV3D-20A0A0C4DH25 116 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 DUSP14O95147 198 aaKnown RBP17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 ARMS2P0C7Q2 107 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 EBLN2Q6P2I7 272 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 LYZL1Q6UWQ5 148 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 TMEM61Q8N0U2 210 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 FER1L6-AS1Q8NA97 138 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 C11orf21Q9P2W6 132 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 GPX1P07203 203 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 SLAQ13239 276 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 FOXI2Q6ZQN5 318 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 NDUFA11Q86Y39 141 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 HIST3H2BBQ8N257 126 aa17.06■□□□□ 0.32
SCAMP3-202ENST00000355379 KLLNB2CW77 178 aa17.04■□□□□ 0.32
SCAMP3-202ENST00000355379 LEPP41159 167 aa17.04■□□□□ 0.32
SCAMP3-202ENST00000355379 KRTAP10-3P60369 221 aa17.04■□□□□ 0.32
SCAMP3-202ENST00000355379 Q0VG73 95 aa17.04■□□□□ 0.32
SCAMP3-202ENST00000355379 SPAG8Q99932 426 aaPredicted RBP17.04■□□□□ 0.32
SCAMP3-202ENST00000355379 F2Z2F3 143 aa17.03■□□□□ 0.32
SCAMP3-202ENST00000355379 TPPP3Q9BW30 176 aa17.03■□□□□ 0.32
SCAMP3-202ENST00000355379 OR4C46A6NHA9 309 aa17.02■□□□□ 0.32
SCAMP3-202ENST00000355379 KIAA1644Q3SXP7 199 aa17.02■□□□□ 0.32
SCAMP3-202ENST00000355379 CD300EQ496F6 205 aaPredicted RBP17.02■□□□□ 0.32
SCAMP3-202ENST00000355379 OR10J3Q5JRS4 329 aa17.02■□□□□ 0.32
SCAMP3-202ENST00000355379 GFI1BQ5VTD9 330 aa17.02■□□□□ 0.32
SCAMP3-202ENST00000355379 CNFNQ9BYD5 112 aa17.02■□□□□ 0.32
SCAMP3-202ENST00000355379 GRIFINA4D1Z8 144 aa17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 CD33P20138 364 aa17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 RNASE4P34096 147 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 AKR1D1P51857 326 aa17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 SSBP4Q9BWG4 385 aaPredicted RBP17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 NSUN5P1Q3KNT7 163 aa17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 ZNF493Q6ZR52 646 aa17.01■□□□□ 0.31
SCAMP3-202ENST00000355379 IFITM10A6NMD0 228 aa17■□□□□ 0.31
SCAMP3-202ENST00000355379 A8MTW9 85 aa17■□□□□ 0.31
SCAMP3-202ENST00000355379 J3KRW8 73 aa17■□□□□ 0.31
SCAMP3-202ENST00000355379 HIVEP1P15822 2718 aa16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 S100A2P29034 98 aa16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 TSPOP30536 169 aa16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 SRIP30626 198 aa16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 DEFB131AP59861 70 aa16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 Q6ZQT7 251 aa16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 ZNF256Q9Y2P7 627 aaPredicted RBP16.99■□□□□ 0.31
SCAMP3-202ENST00000355379 ALKBH7Q9BT30 221 aaPredicted RBP16.98■□□□□ 0.31
SCAMP3-202ENST00000355379 FN1P02751 2386 aaKnown RBP16.98■□□□□ 0.31
SCAMP3-202ENST00000355379 NF1P21359 2839 aa16.98■□□□□ 0.31
SCAMP3-202ENST00000355379 SNAI2O43623 268 aa16.97■□□□□ 0.31
SCAMP3-202ENST00000355379 OR5AL1P0C617 328 aa16.97■□□□□ 0.31
SCAMP3-202ENST00000355379 DNLZQ5SXM8 178 aa16.97■□□□□ 0.31
SCAMP3-202ENST00000355379 MAP6D1Q9H9H5 199 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms