RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 MUC3AQ02505 3323 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 LINC01546A6NGU7 62 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 F8VRH5 84 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
LMNA-201ENST00000347559 CACNA1BQ00975 2339 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 IGHV1-3A0A0C4DH29 117 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 PRTN3P24158 256 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 PDE6HQ13956 83 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 SPENQ96T58 3664 aaKnown RBP11.9□□□□□ -0.5
LMNA-201ENST00000347559 TRBV20-1A0A075B6N2 111 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 A6NJY4 79 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 LOXP28300 417 aaPredicted RBP11.9□□□□□ -0.5
LMNA-201ENST00000347559 GFRALQ6UXV0 394 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 KLHL30-AS1Q8NEE0 82 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 FDCSPQ8NFU4 85 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
LMNA-201ENST00000347559 SEM1Q6ZVN7 128 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 CFHR4Q92496 578 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 TCL1BO95988 128 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 ZNF688P0C7X2 276 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 SLC25A16P16260 332 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 A8MWV9 139 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
LMNA-201ENST00000347559 ANKRD29Q8N6D5 301 aa11.88□□□□□ -0.51
LMNA-201ENST00000347559 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
LMNA-201ENST00000347559 CD40P25942 277 aa11.88□□□□□ -0.51
LMNA-201ENST00000347559 IL17RELQ6ZVW7 336 aa11.88□□□□□ -0.51
LMNA-201ENST00000347559 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
LMNA-201ENST00000347559 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
LMNA-201ENST00000347559 DEFB104AQ8WTQ1 72 aa11.87□□□□□ -0.51
LMNA-201ENST00000347559 LAMTOR5O43504 91 aa11.87□□□□□ -0.51
LMNA-201ENST00000347559 RPL7P18124 248 aaKnown RBP11.87□□□□□ -0.51
LMNA-201ENST00000347559 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
LMNA-201ENST00000347559 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
LMNA-201ENST00000347559 TRIOBPQ9H2D6 2365 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 SPRY2O43597 315 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 EMP1P54849 157 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 TMEM155Q4W5P6 130 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 NRACQ8N912 160 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 TNRC18O15417 2968 aaPredicted RBP11.86□□□□□ -0.51
LMNA-201ENST00000347559 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 DLX6P56179 175 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
LMNA-201ENST00000347559 C3orf36Q3SXR2 165 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 Q6ZS92 163 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 IGKV3D-20A0A0C4DH25 116 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 HERV-K104P63124 156 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 Q6ZQT7 251 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 SMIM20Q8N5G0 67 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
LMNA-201ENST00000347559 IGHV3OR16-13A0A075B7E8 117 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 IGHV3-74A0A0B4J1X5 117 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 IGHV3-66A0A0C4DH42 116 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 H7C2G1 150 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 IGHG4P01861 327 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 LYRM7Q5U5X0 104 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 C8orf31Q8N9H6 132 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 UBE2D1P51668 147 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 MFAP4P55083 255 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 SMAD5-AS1Q9Y6J3 95 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 BUB1B-PAK6H3BSN5 160 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 J3KRW8 73 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
LMNA-201ENST00000347559 UBE2D3P61077 147 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 UBE2D2P62837 147 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 GAGE2EQ4V326 116 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 OR11H6Q8NGC7 330 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 TMEM190Q8WZ59 177 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 GAGE2DQ9UEU5 116 aa11.84□□□□□ -0.51
LMNA-201ENST00000347559 COX8CQ7Z4L0 72 aa11.83□□□□□ -0.52
LMNA-201ENST00000347559 RAB1BQ9H0U4 201 aa11.83□□□□□ -0.52
LMNA-201ENST00000347559 ADGRG4Q8IZF6 3080 aa11.83□□□□□ -0.52
LMNA-201ENST00000347559 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
LMNA-201ENST00000347559 NDUFA11Q86Y39 141 aa11.83□□□□□ -0.52
LMNA-201ENST00000347559 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
LMNA-201ENST00000347559 C9JAW5 83 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 SNCGO76070 127 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 HES1Q14469 280 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 HIF1ANQ9NWT6 349 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 CACNA1HO95180 2353 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 LINC01619G3V211 115 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 TIMM23O14925 209 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 C1orf210Q8IVY1 113 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 ARRDC1-AS1Q9H2J1 176 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 TRAV4A0A0B4J268 109 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms