RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 IGHV4-39P01824 125 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
TDP2-201ENST00000341060 FXYD7P58549 80 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 UBE2V1Q13404 147 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 FAM223AQ8IWN6 122 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 KMT2BQ9UMN6 2715 aaPredicted RBP11.17□□□□□ -0.62
TDP2-201ENST00000341060 UBR5O95071 2799 aaPredicted RBP11.17□□□□□ -0.62
TDP2-201ENST00000341060 DOPEY1Q5JWR5 2465 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 IGHV3-49A0A0A0MS15 119 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 ZNF207O43670 478 aaKnown RBP11.17□□□□□ -0.62
TDP2-201ENST00000341060 PTTG1IPP53801 180 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 CACNG7P62955 275 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 IFI27L1Q96BM0 104 aa11.17□□□□□ -0.62
TDP2-201ENST00000341060 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
TDP2-201ENST00000341060 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
TDP2-201ENST00000341060 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
TDP2-201ENST00000341060 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
TDP2-201ENST00000341060 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
TDP2-201ENST00000341060 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
TDP2-201ENST00000341060 PIFOQ8TCI5 191 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 IGHV1-69DA0A0B4J2H0 117 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 TNFRSF6BO95407 300 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 IGHV1-69P01742 117 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 FGF6P10767 208 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
TDP2-201ENST00000341060 NXT2Q9NPJ8 142 aaKnown RBP11.15□□□□□ -0.62
TDP2-201ENST00000341060 TAX1BP3O14907 124 aa11.14□□□□□ -0.63
TDP2-201ENST00000341060 PPIFP30405 207 aaKnown RBP11.14□□□□□ -0.63
TDP2-201ENST00000341060 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
TDP2-201ENST00000341060 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
TDP2-201ENST00000341060 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
TDP2-201ENST00000341060 LINC00527Q9UJ94 153 aa11.14□□□□□ -0.63
TDP2-201ENST00000341060 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
TDP2-201ENST00000341060 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
TDP2-201ENST00000341060 TRGV3P03979 118 aa11.13□□□□□ -0.63
TDP2-201ENST00000341060 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
TDP2-201ENST00000341060 C9orf139Q6ZV77 190 aa11.13□□□□□ -0.63
TDP2-201ENST00000341060 ARL3P36405 182 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 C16orf92Q96LL3 132 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 IGF1P05019 195 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 FCER1GP30273 86 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
TDP2-201ENST00000341060 SNAI2O43623 268 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 CD5LO43866 347 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 EVI2AP22794 236 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 LEPP41159 167 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 FOXE3Q13461 319 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 CENPEQ02224 2701 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
TDP2-201ENST00000341060 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 IGHV4-61A0A0C4DH41 118 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 NDUFA4O00483 81 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 BRI3O95415 125 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 GATA1P15976 413 aaPredicted RBP11.1□□□□□ -0.63
TDP2-201ENST00000341060 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 SMIM15Q7Z3B0 74 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
TDP2-201ENST00000341060 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 VAMP3Q15836 100 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 Q8N8P6 123 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 C20orf173Q96LM9 149 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 DKK2Q9UBU2 259 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 PRSS47A8MTI9 375 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 H3BUA1 57 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
TDP2-201ENST00000341060 IGHG2P01859 326 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 SEC11AP67812 179 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 TMEM97Q5BJF2 176 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 PRR9Q5T870 116 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 Q6ZQT7 251 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 WFDC3Q8IUB2 231 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 OR2K2Q8NGT1 345 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 C10orf105Q8TEF2 133 aa11.09□□□□□ -0.63
TDP2-201ENST00000341060 IGHV4-38-2P0DP08 117 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 USMG5Q96IX5 58 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 CCL19Q99731 98 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 TENM4Q6N022 2769 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 NDUFS8O00217 210 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 SOCS3O14543 225 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 SIVA1O15304 175 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
TDP2-201ENST00000341060 ODF1Q14990 250 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 NRACQ8N912 160 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 OR4C5Q8NGB2 326 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
TDP2-201ENST00000341060 MAP1AP78559 2803 aaPredicted RBP11.07□□□□□ -0.64
TDP2-201ENST00000341060 ERASQ7Z444 233 aa11.07□□□□□ -0.64
TDP2-201ENST00000341060 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms