RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LENEPQ9Y5L5 61 aa10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 KNCNA6PVL3 124 aa10.96□□□□□ -0.65
CDK5RAP3-201ENST00000338399 SH2D1AO60880 128 aa10.96□□□□□ -0.65
CDK5RAP3-201ENST00000338399 IGKV3-20P01619 116 aa10.96□□□□□ -0.65
CDK5RAP3-201ENST00000338399 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.65
CDK5RAP3-201ENST00000338399 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.65
CDK5RAP3-201ENST00000338399 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-201ENST00000338399 TGIF2-C20orf24A0A0A6YYL0 155 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 ACTL10Q5JWF8 245 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 PRR9Q5T870 116 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 KCNIP4Q6PIL6 250 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 APRG1Q8IVJ8 170 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 FABP5P3A8MUU1 101 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 CXCL1P09341 107 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 C9orf66Q5T8R8 295 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 LURAP1LQ8IV03 231 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 ZFAND2AQ8N6M9 145 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 OR2D3Q8NGH3 330 aa10.95□□□□□ -0.66
CDK5RAP3-201ENST00000338399 A0A1W2PPQ1 181 aa10.94□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TCL1AP56279 114 aa10.94□□□□□ -0.66
CDK5RAP3-201ENST00000338399 KIR3DS1Q14943 382 aa10.94□□□□□ -0.66
CDK5RAP3-201ENST00000338399 ZMAT5Q9UDW3 170 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TRBV7-9A0A0J9YWB2 115 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 OR11H12B2RN74 326 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 GPX1P07203 203 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 CRISP2P16562 243 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 INSL3P51460 131 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 SMIM27A0A1W2PRY6 76 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 H3BMM0 161 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 CT83Q5H943 113 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 Q6ZQT7 251 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 WFDC9Q8NEX5 89 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TSKUQ8WUA8 353 aa10.93□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 A8MWL6 223 aa10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 CD7P09564 240 aa10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 SMIM6P0DI80 62 aa10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 GZMBP10144 247 aa10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TRBV24-1A0A075B6N3 115 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TMEM189A5PLL7 270 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 ORM1P02763 201 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 LEPP41159 167 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 FAM210BQ96KR6 192 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 NEU1Q99519 415 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 PYGO2Q9BRQ0 406 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 MCRIP2Q9BUT9 160 aaKnown RBP10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 VWFP04275 2813 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 KLLNB2CW77 178 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 M0R2Z0 102 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 S100A8P05109 93 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 IGLL1P15814 213 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 RAB5AP20339 215 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 CMC4P56277 68 aaPredicted RBP10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 RAB5BP61020 215 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 GTSF1Q8WW33 167 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 C11orf21Q9P2W6 132 aa10.91□□□□□ -0.66
CDK5RAP3-201ENST00000338399 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
CDK5RAP3-201ENST00000338399 SPINK4O60575 86 aa10.9□□□□□ -0.66
CDK5RAP3-201ENST00000338399 FXYD7P58549 80 aa10.9□□□□□ -0.66
CDK5RAP3-201ENST00000338399 SPINK13Q1W4C9 94 aa10.9□□□□□ -0.66
CDK5RAP3-201ENST00000338399 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
CDK5RAP3-201ENST00000338399 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TRAV12-2A0A075B6T6 113 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 RBMY1BA6NDE4 496 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 RBMY1EA6NEQ0 496 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 A8MTW9 85 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 RBMY1DP0C7P1 496 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 CDKN1BP46527 198 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 NAT8BQ9UHF3 227 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 IGKV3D-20A0A0C4DH25 116 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TSPOP30536 169 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 Q6AWC8 147 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 STHQ8IWL8 128 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 WFDC10AQ9H1F0 79 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 C19orf73Q9NVV2 129 aa10.89□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TRAV12-3A0A0B4J271 114 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 UBE2CO00762 179 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 RPS10P46783 165 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 GFI1BQ5VTD9 330 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 ZNF575Q86XF7 245 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 ZFP82Q8N141 532 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 PGLYRP4Q96LB8 373 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 FAM110AQ9BQ89 295 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms