RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RAB5AP20339 215 aa10.94□□□□□ -0.66
CBX3-201ENST00000337620 RPL19P84098 196 aaKnown RBP10.94□□□□□ -0.66
CBX3-201ENST00000337620 ZNF124Q15973 351 aa10.94□□□□□ -0.66
CBX3-201ENST00000337620 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
CBX3-201ENST00000337620 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CBX3-201ENST00000337620 MAP6D1Q9H9H5 199 aa10.94□□□□□ -0.66
CBX3-201ENST00000337620 TRBV24-1A0A075B6N3 115 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 SMIM27A0A1W2PRY6 76 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 KNCNA6PVL3 124 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 A8MWL6 223 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 ACTL10Q5JWF8 245 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 SPATA3Q8NHX4 192 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 TSKUQ8WUA8 353 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 GPX1P07203 203 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 GZMBP10144 247 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 PRR9Q5T870 116 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 APRG1Q8IVJ8 170 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 ZNF747Q9BV97 191 aa10.93□□□□□ -0.66
CBX3-201ENST00000337620 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 TMEM189A5PLL7 270 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 SPINK4O60575 86 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CBX3-201ENST00000337620 ORM1P02763 201 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 RPS10P46783 165 aaKnown RBP10.92□□□□□ -0.66
CBX3-201ENST00000337620 CT83Q5H943 113 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 ZFAND2AQ8N6M9 145 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 NEU1Q99519 415 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 AGRNO00468 2067 aa10.92□□□□□ -0.66
CBX3-201ENST00000337620 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
CBX3-201ENST00000337620 KIR3DS1Q14943 382 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 C12orf54Q6X4T0 127 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 OR2K2Q8NGT1 345 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 ODF3L2Q3SX64 289 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 Q6ZQT7 251 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 TMEM158Q8WZ71 300 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 BTF3L4Q96K17 158 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 TRRAPQ9Y4A5 3859 aa10.91□□□□□ -0.66
CBX3-201ENST00000337620 TRBV7-9A0A0J9YWB2 115 aa10.9□□□□□ -0.66
CBX3-201ENST00000337620 CRISP2P16562 243 aa10.9□□□□□ -0.66
CBX3-201ENST00000337620 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
CBX3-201ENST00000337620 NAT8BQ9UHF3 227 aa10.9□□□□□ -0.66
CBX3-201ENST00000337620 OR11H12B2RN74 326 aa10.9□□□□□ -0.67
CBX3-201ENST00000337620 HLA-DRB4P13762 266 aa10.9□□□□□ -0.67
CBX3-201ENST00000337620 GTSF1Q8WW33 167 aa10.9□□□□□ -0.67
CBX3-201ENST00000337620 HLA-DRB4X5D2U9 266 aa10.9□□□□□ -0.67
CBX3-201ENST00000337620 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
CBX3-201ENST00000337620 H3BMM0 161 aa10.89□□□□□ -0.67
CBX3-201ENST00000337620 LEPP41159 167 aa10.89□□□□□ -0.67
CBX3-201ENST00000337620 C9orf66Q5T8R8 295 aa10.89□□□□□ -0.67
CBX3-201ENST00000337620 PGLYRP4Q96LB8 373 aa10.89□□□□□ -0.67
CBX3-201ENST00000337620 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
CBX3-201ENST00000337620 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 M0R2Z0 102 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 INSL3P51460 131 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 ODF3Q96PU9 254 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 KLLNB2CW77 178 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 CD7P09564 240 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 MRPL54Q6P161 138 aaKnown RBP10.88□□□□□ -0.67
CBX3-201ENST00000337620 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 ZMAT5Q9UDW3 170 aaKnown RBP10.88□□□□□ -0.67
CBX3-201ENST00000337620 NAGKQ9UJ70 344 aa10.88□□□□□ -0.67
CBX3-201ENST00000337620 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 TSPOP30536 169 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 CDKN1BP46527 198 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 CMC4P56277 68 aaPredicted RBP10.87□□□□□ -0.67
CBX3-201ENST00000337620 FXYD7P58549 80 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 BEAN1Q3B7T3 259 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 LINC01559Q495D7 138 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 SRD5A3Q9H8P0 318 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 STAB1Q9NY15 2570 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 IGKV3D-20A0A0C4DH25 116 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 TYMSP04818 313 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 FRMD6-AS1P0C7T7 363 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
CBX3-201ENST00000337620 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
CBX3-201ENST00000337620 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
CBX3-201ENST00000337620 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
CBX3-201ENST00000337620 Q6AWC8 147 aa10.86□□□□□ -0.67
CBX3-201ENST00000337620 STHQ8IWL8 128 aa10.86□□□□□ -0.67
CBX3-201ENST00000337620 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
CBX3-201ENST00000337620 TRGC2P03986 189 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 MUC21Q5SSG8 566 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 GFI1BQ5VTD9 330 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 ZNF575Q86XF7 245 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 C7orf71A4D174 169 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
CBX3-201ENST00000337620 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
CBX3-201ENST00000337620 C1orf196B1AJZ1 125 aa10.85□□□□□ -0.67
CBX3-201ENST00000337620 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
CBX3-201ENST00000337620 IGLL1P15814 213 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms