RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 VEGFBP49765 207 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 C9orf139Q6ZV77 190 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 A0A1W2PNR3 127 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 C12orf77C9JDV5 145 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 LST1O00453 97 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 AVPP01185 164 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 FOXF2Q12947 444 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 PLGLAQ15195 96 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 PROK2Q9HC23 129 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 FSCN3Q9NQT6 498 aa6.63□□□□□ -1.35
TDP1-201ENST00000335725 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
TDP1-201ENST00000335725 EEF1AKMT3Q96AZ1 226 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 TRAV3A0A0B4J244 114 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 M0R3E3 92 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 FHL2Q14192 279 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 ORMDL2Q53FV1 153 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 LY6G5CQ5SRR4 150 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 PATE2Q6UY27 113 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 CABIN1Q9Y6J0 2220 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 UNC13CQ8NB66 2214 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 HOXB4P17483 251 aaPredicted RBP6.62□□□□□ -1.35
TDP1-201ENST00000335725 PRCDQ00LT1 54 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 FAM53AQ6NSI3 398 aaPredicted RBP6.62□□□□□ -1.35
TDP1-201ENST00000335725 SLC50A1Q9BRV3 221 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 SLC25A15Q9Y619 301 aa6.62□□□□□ -1.35
TDP1-201ENST00000335725 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 J3QT63 122 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 RBMY1A1P0DJD3 496 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 RNASE2P10153 161 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 LIFP15018 202 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 DLX1P56177 255 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 RBMY1FQ15415 496 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 ABCA7Q8IZY2 2146 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 VKORC1L1Q8N0U8 176 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 C17orf77Q96MU5 243 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 SRCAPQ6ZRS2 3230 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 KLHL30-AS1Q8NEE0 82 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 IGLV2-11P01706 119 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
TDP1-201ENST00000335725 DCANP1Q8TF63 244 aa6.61□□□□□ -1.35
TDP1-201ENST00000335725 IGLV2-18A0A075B6J9 118 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 EFNA2O43921 213 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 ERHP84090 104 aaKnown RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 DEFB110Q30KQ9 67 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 Q6JHZ5 121 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 C16orf47Q6ZP98 133 aaPredicted RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 ZCCHC24Q8N2G6 241 aaKnown RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 RNF185Q96GF1 192 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 CGB1A6NKQ9 187 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 SS18L1O75177 396 aaPredicted RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 FSTL3O95633 263 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 NFAM1Q8NET5 270 aaPredicted RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 FGF23Q9GZV9 251 aaPredicted RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 BUB3O43684 328 aa6.6□□□□□ -1.35
TDP1-201ENST00000335725 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
TDP1-201ENST00000335725 DIDO1Q9BTC0 2240 aaKnown RBP6.59□□□□□ -1.35
TDP1-201ENST00000335725 CACNA1IQ9P0X4 2223 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 PRR15Q8IV56 129 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 GNG12Q9UBI6 72 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 ESPL1Q14674 2120 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 TRAV8-3A0A0A6YYJ7 113 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 FKBP1BP68106 108 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 Q6ZS46 218 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 FAM216BQ8N7L0 139 aa6.59□□□□□ -1.35
TDP1-201ENST00000335725 GP9P14770 177 aa6.59□□□□□ -1.36
TDP1-201ENST00000335725 LINC00205P59089 165 aa6.59□□□□□ -1.36
TDP1-201ENST00000335725 Q6ZRU5 148 aa6.59□□□□□ -1.36
TDP1-201ENST00000335725 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.36
TDP1-201ENST00000335725 THAP8Q8NA92 274 aa6.59□□□□□ -1.36
TDP1-201ENST00000335725 DAZ1Q9NQZ3 744 aaKnown RBP6.59□□□□□ -1.36
TDP1-201ENST00000335725 HOXA4Q00056 320 aaPredicted RBP6.58□□□□□ -1.36
TDP1-201ENST00000335725 TOMM6Q96B49 74 aa6.58□□□□□ -1.36
TDP1-201ENST00000335725 PRSS38A1L453 326 aa6.58□□□□□ -1.36
TDP1-201ENST00000335725 LILRA5A6NI73 299 aa6.58□□□□□ -1.36
TDP1-201ENST00000335725 MUSTN1Q8IVN3 82 aa6.58□□□□□ -1.36
TDP1-201ENST00000335725 ZNF71Q9NQZ8 489 aaPredicted RBP6.58□□□□□ -1.36
TDP1-201ENST00000335725 USF3Q68DE3 2245 aa6.58□□□□□ -1.36
TDP1-201ENST00000335725 LYPD1Q8N2G4 141 aa6.58□□□□□ -1.36
TDP1-201ENST00000335725 EML6Q6ZMW3 1958 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 CRIP1P50238 77 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 TMEM14CQ9P0S9 112 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 H3BTX0 84 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 CCL21O00585 134 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 TIMM17BO60830 172 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 PF4P02776 101 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 PRSS2P07478 247 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 IGFL2Q6UWQ7 119 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 DYNAPQ8N1N2 210 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms