RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF80P51504 273 aaPredicted RBP15.78■□□□□ 0.12
TPM1-204ENST00000334895 RPL23P62829 140 aaKnown RBP15.78■□□□□ 0.12
TPM1-204ENST00000334895 SMIM12Q96EX1 92 aa15.78■□□□□ 0.12
TPM1-204ENST00000334895 GIG44P09565 113 aaPredicted RBP15.77■□□□□ 0.12
TPM1-204ENST00000334895 IGHV4-30-4P0DP06 118 aa15.77■□□□□ 0.12
TPM1-204ENST00000334895 LEPP41159 167 aa15.77■□□□□ 0.12
TPM1-204ENST00000334895 CRIP1P50238 77 aa15.77■□□□□ 0.12
TPM1-204ENST00000334895 DEFA6Q01524 100 aa15.77■□□□□ 0.12
TPM1-204ENST00000334895 LINC00322Q6ZN03 302 aaPredicted RBP15.77■□□□□ 0.12
TPM1-204ENST00000334895 Q6ZQT7 251 aa15.77■□□□□ 0.12
TPM1-204ENST00000334895 MEGF8Q7Z7M0 2845 aa15.77■□□□□ 0.11
TPM1-204ENST00000334895 TRAV12-2A0A075B6T6 113 aa15.76■□□□□ 0.11
TPM1-204ENST00000334895 CRXO43186 299 aaPredicted RBP15.76■□□□□ 0.11
TPM1-204ENST00000334895 MGST1P10620 155 aaKnown RBP15.76■□□□□ 0.11
TPM1-204ENST00000334895 CDKN1BP46527 198 aa15.76■□□□□ 0.11
TPM1-204ENST00000334895 OR5I1Q13606 314 aa15.76■□□□□ 0.11
TPM1-204ENST00000334895 GCGP01275 180 aa15.76■□□□□ 0.11
TPM1-204ENST00000334895 BTN1A1Q13410 526 aa15.76■□□□□ 0.11
TPM1-204ENST00000334895 SMUG1Q53HV7 270 aa15.76■□□□□ 0.11
TPM1-204ENST00000334895 ATP6V1G1O75348 118 aa15.75■□□□□ 0.11
TPM1-204ENST00000334895 GPX1P07203 203 aa15.75■□□□□ 0.11
TPM1-204ENST00000334895 TSPOP30536 169 aa15.75■□□□□ 0.11
TPM1-204ENST00000334895 ADIRFQ15847 76 aa15.75■□□□□ 0.11
TPM1-204ENST00000334895 GFI1BQ5VTD9 330 aa15.75■□□□□ 0.11
TPM1-204ENST00000334895 PRR27Q6MZM9 219 aa15.74■□□□□ 0.11
TPM1-204ENST00000334895 RNASE4P34096 147 aaKnown RBP15.73■□□□□ 0.11
TPM1-204ENST00000334895 ISOC2Q96AB3 205 aa15.73■□□□□ 0.11
TPM1-204ENST00000334895 TUBA4BQ9H853 241 aa15.73■□□□□ 0.11
TPM1-204ENST00000334895 LOC102724200A0A096LPH7 203 aaPredicted RBP15.72■□□□□ 0.11
TPM1-204ENST00000334895 A8MZ25 164 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 APOC3P02656 99 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 RBMY1A1P0DJD3 496 aaKnown RBP15.72■□□□□ 0.11
TPM1-204ENST00000334895 RBMY1CP0DJD4 496 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 RBMY1FQ15415 496 aaKnown RBP15.72■□□□□ 0.11
TPM1-204ENST00000334895 XCL2Q9UBD3 114 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 C7orf71A4D174 169 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 K7EIL1 84 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 Q6AWC8 147 aa15.72■□□□□ 0.11
TPM1-204ENST00000334895 MORN3Q6PF18 240 aaPredicted RBP15.72■□□□□ 0.11
TPM1-204ENST00000334895 TRAV12-3A0A0B4J271 114 aa15.71■□□□□ 0.11
TPM1-204ENST00000334895 C19orf71A6NCJ1 209 aa15.71■□□□□ 0.11
TPM1-204ENST00000334895 SH2D1AO60880 128 aa15.71■□□□□ 0.11
TPM1-204ENST00000334895 NUTF2P61970 127 aaKnown RBP15.71■□□□□ 0.11
TPM1-204ENST00000334895 PNRC1Q12796 327 aaPredicted RBP15.71■□□□□ 0.11
TPM1-204ENST00000334895 ZNF324O75467 553 aaPredicted RBP15.7■□□□□ 0.1
TPM1-204ENST00000334895 PFN1P07737 140 aaKnown RBP15.7■□□□□ 0.1
TPM1-204ENST00000334895 FAM162BQ5T6X4 162 aa15.7■□□□□ 0.1
TPM1-204ENST00000334895 CSTL1Q9H114 145 aa15.7■□□□□ 0.1
TPM1-204ENST00000334895 RNASE7Q9H1E1 156 aaKnown RBP15.7■□□□□ 0.1
TPM1-204ENST00000334895 C11orf21Q9P2W6 132 aa15.7■□□□□ 0.1
TPM1-204ENST00000334895 CA1P00915 261 aaPredicted RBP15.69■□□□□ 0.1
TPM1-204ENST00000334895 AMBPP02760 352 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 CSNK1G2-AS1Q8NCQ2 148 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 KIR2DL5BA0A0G2JN68 375 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 KIR2DL5BA0A0G2JPC4 375 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 FABP5P3A8MUU1 101 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 M0R036 132 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 KIR2DL5AQ8N109 375 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 NUDT10Q8NFP7 164 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 KIR2DL5BQ8NHK3 375 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 NUDT11Q96G61 164 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 BIN3Q9NQY0 253 aa15.68■□□□□ 0.1
TPM1-204ENST00000334895 TRAV21A0A0B4J279 112 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 INSP01308 110 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 FRMD6-AS1P0C7T7 363 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 FAM231DQ6ZW35 169 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 C1orf158Q8N1D5 194 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 CLRN3Q8NCR9 226 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 SFRP2Q96HF1 295 aa15.67■□□□□ 0.1
TPM1-204ENST00000334895 ERVFC1-1P60608 527 aa15.66■□□□□ 0.1
TPM1-204ENST00000334895 IBA57Q5T440 356 aaKnown RBP15.66■□□□□ 0.1
TPM1-204ENST00000334895 SVBPQ8N300 66 aa15.66■□□□□ 0.1
TPM1-204ENST00000334895 APOC4P55056 127 aa15.65■□□□□ 0.1
TPM1-204ENST00000334895 ZNF575Q86XF7 245 aa15.65■□□□□ 0.1
TPM1-204ENST00000334895 C1QTNF4Q9BXJ3 329 aa15.65■□□□□ 0.1
TPM1-204ENST00000334895 OSTCQ9NRP0 149 aa15.65■□□□□ 0.1
TPM1-204ENST00000334895 IGKV3D-20A0A0C4DH25 116 aa15.65■□□□□ 0.1
TPM1-204ENST00000334895 RPL19P84098 196 aaKnown RBP15.65■□□□□ 0.1
TPM1-204ENST00000334895 RNF212Q495C1 297 aa15.65■□□□□ 0.1
TPM1-204ENST00000334895 MUC21Q5SSG8 566 aa15.64■□□□□ 0.09
TPM1-204ENST00000334895 ATRAIDQ6UW56 229 aa15.64■□□□□ 0.09
TPM1-204ENST00000334895 DAZAP1Q96EP5 407 aaKnown RBP15.64■□□□□ 0.09
TPM1-204ENST00000334895 C20orf144Q9BQM9 153 aa15.64■□□□□ 0.09
TPM1-204ENST00000334895 P01737 135 aa15.63■□□□□ 0.09
TPM1-204ENST00000334895 LINC01559Q495D7 138 aa15.63■□□□□ 0.09
TPM1-204ENST00000334895 OR10G8Q8NGN5 311 aa15.63■□□□□ 0.09
TPM1-204ENST00000334895 NAGKQ9UJ70 344 aa15.63■□□□□ 0.09
TPM1-204ENST00000334895 V9GYV3 84 aa15.63■□□□□ 0.09
TPM1-204ENST00000334895 C7orf77A4D0Y5 90 aa15.62■□□□□ 0.09
TPM1-204ENST00000334895 SNAPINO95295 136 aa15.62■□□□□ 0.09
TPM1-204ENST00000334895 ANXA2RQ3ZCQ2 193 aa15.62■□□□□ 0.09
TPM1-204ENST00000334895 MRAPQ8TCY5 172 aa15.62■□□□□ 0.09
TPM1-204ENST00000334895 B4DEV8 164 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 ORM1P02763 201 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 PRM2P04554 102 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 RPP21Q9H633 154 aaKnown RBP15.61■□□□□ 0.09
TPM1-204ENST00000334895 PRKDCP78527 4128 aaKnown RBP15.61■□□□□ 0.09
TPM1-204ENST00000334895 TMSB15BA0A087X1C1 80 aa15.61■□□□□ 0.09
TPM1-204ENST00000334895 ZNF705GA8MUZ8 300 aaPredicted RBP15.61■□□□□ 0.09
TPM1-204ENST00000334895 GATCO43716 136 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms