RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HYLS1Q96M11 299 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 OTORQ9NRC9 128 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 TP53TG3Q9ULZ0 132 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 NACAE9PAV3 2078 aa12.31□□□□□ -0.44
TPM1-203ENST00000317516 PGPA6NDG6 321 aa12.31□□□□□ -0.44
TPM1-203ENST00000317516 ARL6IP6Q8N6S5 226 aa12.31□□□□□ -0.44
TPM1-203ENST00000317516 TMED6Q8WW62 240 aa12.31□□□□□ -0.44
TPM1-203ENST00000317516 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
TPM1-203ENST00000317516 WFDC1Q9HC57 220 aa12.31□□□□□ -0.44
TPM1-203ENST00000317516 MRPS16Q9Y3D3 137 aaKnown RBP12.31□□□□□ -0.44
TPM1-203ENST00000317516 PAX4O43316 350 aa12.3□□□□□ -0.44
TPM1-203ENST00000317516 FAM159AQ6UWV7 190 aa12.3□□□□□ -0.44
TPM1-203ENST00000317516 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
TPM1-203ENST00000317516 A0A096LPF7 62 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 A0A1W2PPQ1 181 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 TNP2Q05952 138 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 Q6AWC8 147 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 Q6ZQT7 251 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 MED28Q9H204 178 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
TPM1-203ENST00000317516 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
TPM1-203ENST00000317516 TRGV11A0A075B6L2 103 aa12.28□□□□□ -0.44
TPM1-203ENST00000317516 PTTG1O95997 202 aa12.28□□□□□ -0.44
TPM1-203ENST00000317516 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
TPM1-203ENST00000317516 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
TPM1-203ENST00000317516 SPXQ9BT56 116 aa12.28□□□□□ -0.44
TPM1-203ENST00000317516 HHLA3Q9XRX5 114 aa12.28□□□□□ -0.44
TPM1-203ENST00000317516 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
TPM1-203ENST00000317516 IGHV3-53P01767 116 aa12.27□□□□□ -0.45
TPM1-203ENST00000317516 RAB2AP61019 212 aa12.27□□□□□ -0.45
TPM1-203ENST00000317516 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.45
TPM1-203ENST00000317516 DNAH2Q9P225 4427 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 EIF3GO75821 320 aaKnown RBP eCLIP12.26□□□□□ -0.45
TPM1-203ENST00000317516 MBP02144 154 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 TMEM183BQ1AE95 376 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 GOLT1AQ6ZVE7 132 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 MDFICQ9P1T7 246 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 FAT2Q9NYQ8 4349 aa12.26□□□□□ -0.45
TPM1-203ENST00000317516 TRGV4A0A0C4DH28 118 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 CDC34P49427 236 aaPredicted RBP12.25□□□□□ -0.45
TPM1-203ENST00000317516 CRYBA4P53673 196 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
TPM1-203ENST00000317516 ZNF575Q86XF7 245 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 OR2G3Q8NGZ4 309 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 AQP10Q96PS8 301 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 PSMG3Q9BT73 122 aaPredicted RBP12.25□□□□□ -0.45
TPM1-203ENST00000317516 DNAH17Q9UFH2 4485 aa12.25□□□□□ -0.45
TPM1-203ENST00000317516 TRAV21A0A0B4J279 112 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
TPM1-203ENST00000317516 SERF2P84101 59 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 FHL2Q14192 279 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 ASB13Q8WXK3 278 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 RASL10AQ92737 203 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 TREM1Q9NP99 234 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
TPM1-203ENST00000317516 HERC2O95714 4834 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 C16orf90A8MZG2 172 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 K7EQM0 130 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 SIVA1O15304 175 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 ARL14EPLP0DKL9 152 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 INO80EQ8NBZ0 244 aaPredicted RBP12.23□□□□□ -0.45
TPM1-203ENST00000317516 NDFIP1Q9BT67 221 aa12.23□□□□□ -0.45
TPM1-203ENST00000317516 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
TPM1-203ENST00000317516 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
TPM1-203ENST00000317516 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
TPM1-203ENST00000317516 KRTAP17-1Q9BYP8 105 aa12.22□□□□□ -0.45
TPM1-203ENST00000317516 KRTAP1-5Q9BYS1 174 aa12.22□□□□□ -0.45
TPM1-203ENST00000317516 GIPP09681 153 aaPredicted RBP12.21□□□□□ -0.45
TPM1-203ENST00000317516 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
TPM1-203ENST00000317516 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
TPM1-203ENST00000317516 PCNPQ8WW12 178 aaKnown RBP12.21□□□□□ -0.45
TPM1-203ENST00000317516 ACTR3CQ9C0K3 210 aaPredicted RBP12.21□□□□□ -0.45
TPM1-203ENST00000317516 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.45
TPM1-203ENST00000317516 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
TPM1-203ENST00000317516 TNFSF18Q9UNG2 199 aa12.21□□□□□ -0.45
TPM1-203ENST00000317516 KIAA1109Q2LD37 5005 aa12.21□□□□□ -0.45
TPM1-203ENST00000317516 MUC4Q99102 2169 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 TRAV8-1A0A0A6YYK1 113 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 M0R2P5 195 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 GNRH2O43555 120 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 NXPH4O95158 308 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 ORM1P02763 201 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 GCHFRP30047 84 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 GNG5P63218 68 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 ZNF479Q96JC4 524 aa12.2□□□□□ -0.46
TPM1-203ENST00000317516 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
TPM1-203ENST00000317516 BORCS7-ASMTA0A0B4J1R7 106 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms