RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 TACC2O95359 2948 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 TMEM213A2RRL7 107 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 FOSL1P15407 271 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
VAMP2-201ENST00000316509 TRAV21A0A0B4J279 112 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 C20orf202A1L168 122 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 C2orf70A6NJV1 201 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
VAMP2-201ENST00000316509 HOXA3O43365 443 aaPredicted RBP10.56□□□□□ -0.72
VAMP2-201ENST00000316509 RPL11P62913 178 aaKnown RBP10.56□□□□□ -0.72
VAMP2-201ENST00000316509 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 OR8A1Q8NGG7 326 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.56□□□□□ -0.728e-7■■□□□ 12.5
VAMP2-201ENST00000316509 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 LEPROTL1O95214 131 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 SSTP61278 116 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 TMEM95Q3KNT9 176 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 MRPL51Q4U2R6 128 aaKnown RBP10.56□□□□□ -0.72
VAMP2-201ENST00000316509 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 SMIM15Q7Z3B0 74 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
VAMP2-201ENST00000316509 TMEM70Q9BUB7 260 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
VAMP2-201ENST00000316509 SNAI2O43623 268 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 A0A1B0GV90 55 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 EBLN2Q6P2I7 272 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 AMN1Q8IY45 258 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 KLHDC1Q8N7A1 406 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
VAMP2-201ENST00000316509 D6R8Y8 96 aa10.54□□□□□ -0.72
VAMP2-201ENST00000316509 RPLP1P05386 114 aaKnown RBP10.54□□□□□ -0.72
VAMP2-201ENST00000316509 CKS2P33552 79 aa10.54□□□□□ -0.72
VAMP2-201ENST00000316509 ZFAND2AQ8N6M9 145 aa10.54□□□□□ -0.72
VAMP2-201ENST00000316509 LRRK2Q5S007 2527 aa10.54□□□□□ -0.72
VAMP2-201ENST00000316509 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
VAMP2-201ENST00000316509 OR10AG1Q8NH19 301 aa10.53□□□□□ -0.72
VAMP2-201ENST00000316509 C11orf21Q9P2W6 132 aa10.53□□□□□ -0.72
VAMP2-201ENST00000316509 PRRC2AP48634 2157 aaKnown RBP10.53□□□□□ -0.72
VAMP2-201ENST00000316509 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
VAMP2-201ENST00000316509 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
VAMP2-201ENST00000316509 COL12A1Q99715 3063 aa10.53□□□□□ -0.72
VAMP2-201ENST00000316509 DCANP1Q8TF63 244 aa10.52□□□□□ -0.72
VAMP2-201ENST00000316509 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
VAMP2-201ENST00000316509 TCF21O43680 179 aa10.52□□□□□ -0.73
VAMP2-201ENST00000316509 WFDC12Q8WWY7 111 aa10.52□□□□□ -0.73
VAMP2-201ENST00000316509 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
VAMP2-201ENST00000316509 LINC01546A6NGU7 62 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 M0QZ24 198 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 TDRG1Q3Y452 100 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 SPATA12Q7Z6I5 190 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 PAM16Q9Y3D7 125 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 CR1P17927 2039 aa10.51□□□□□ -0.73
VAMP2-201ENST00000316509 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 CSN3P07498 182 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 SNRPD3P62318 126 aaKnown RBP10.5□□□□□ -0.73
VAMP2-201ENST00000316509 PRR31Q5SQ13 230 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 MAP1LC3AQ9H492 121 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 SPATA45Q537H7 98 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 C10orf99Q6UWK7 81 aa10.5□□□□□ -0.73
VAMP2-201ENST00000316509 IFI27P40305 119 aaPredicted RBP10.49□□□□□ -0.73
VAMP2-201ENST00000316509 LEPP41159 167 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 MS4A6AQ9H2W1 248 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 NXT2Q9NPJ8 142 aaKnown RBP10.49□□□□□ -0.73
VAMP2-201ENST00000316509 MUC21A0A0G2JKD1 596 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 MUC21A0A140T8X8 626 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 KLLNB2CW77 178 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 K7EQG2 157 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 ASIPP42127 132 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 PRR9Q5T870 116 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 SPANXN1Q5VSR9 72 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 MSRB1Q9NZV6 116 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 UQCR10Q9UDW1 63 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 SPG11Q96JI7 2443 aa10.49□□□□□ -0.73
VAMP2-201ENST00000316509 IGHV4OR15-8A0A075B7B6 117 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 A0A087WW49 117 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
VAMP2-201ENST00000316509 FOXC2Q99958 501 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 ZNF747Q9BV97 191 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 M0R143 59 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
VAMP2-201ENST00000316509 NPYP01303 97 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
VAMP2-201ENST00000316509 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
VAMP2-201ENST00000316509 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms