RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 A1L4Q6 167 aa18.75■□□□□ 0.59
SPTSSA-201ENST00000298130 K7EMI3 77 aa18.75■□□□□ 0.59
SPTSSA-201ENST00000298130 JMJD8Q96S16 334 aa18.75■□□□□ 0.59
SPTSSA-201ENST00000298130 FBLL1A6NHQ2 334 aaKnown RBP18.74■□□□□ 0.59
SPTSSA-201ENST00000298130 H3BUT2 72 aa18.74■□□□□ 0.59
SPTSSA-201ENST00000298130 KLRB1Q12918 225 aa18.74■□□□□ 0.59
SPTSSA-201ENST00000298130 TMEM158Q8WZ71 300 aa18.74■□□□□ 0.59
SPTSSA-201ENST00000298130 C1orf122Q6ZSJ8 110 aa18.73■□□□□ 0.59
SPTSSA-201ENST00000298130 PEF1Q9UBV8 284 aaKnown RBP18.73■□□□□ 0.59
SPTSSA-201ENST00000298130 GAGE12BA1L429 117 aa18.72■□□□□ 0.59
SPTSSA-201ENST00000298130 KIR3DS1Q14943 382 aa18.72■□□□□ 0.59
SPTSSA-201ENST00000298130 C8orf86Q6ZUL3 223 aa18.72■□□□□ 0.59
SPTSSA-201ENST00000298130 FOXC2Q99958 501 aa18.72■□□□□ 0.59
SPTSSA-201ENST00000298130 IGKV3-7A0A075B6H7 116 aa18.71■□□□□ 0.59
SPTSSA-201ENST00000298130 OOSP1A8MZH6 123 aa18.71■□□□□ 0.59
SPTSSA-201ENST00000298130 LY6DQ14210 128 aa18.71■□□□□ 0.59
SPTSSA-201ENST00000298130 GTSCR1Q86UQ5 136 aa18.71■□□□□ 0.59
SPTSSA-201ENST00000298130 LINC01559Q495D7 138 aa18.71■□□□□ 0.59
SPTSSA-201ENST00000298130 UBE2E1P51965 193 aa18.7■□□□□ 0.58
SPTSSA-201ENST00000298130 BRD3OSQ6XYD6 125 aa18.7■□□□□ 0.58
SPTSSA-201ENST00000298130 TMEM190Q8WZ59 177 aa18.7■□□□□ 0.58
SPTSSA-201ENST00000298130 TMEM78Q5T7P6 136 aa18.7■□□□□ 0.58
SPTSSA-201ENST00000298130 PRR9Q5T870 116 aa18.7■□□□□ 0.58
SPTSSA-201ENST00000298130 ADAMTSL5Q6ZMM2 481 aa18.7■□□□□ 0.58
SPTSSA-201ENST00000298130 GAGE10A6NGK3 116 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 TRBV12-3P01733 135 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 OR1N2Q8NGR9 330 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 CENPVL3A0A0U1RRI6 287 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 ODF1Q14990 250 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 OCIAD2Q56VL3 154 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 METTL26Q96S19 204 aa18.69■□□□□ 0.58
SPTSSA-201ENST00000298130 H3BVH4 76 aa18.68■□□□□ 0.58
SPTSSA-201ENST00000298130 FCER1GP30273 86 aa18.68■□□□□ 0.58
SPTSSA-201ENST00000298130 CNFNQ9BYD5 112 aa18.68■□□□□ 0.58
SPTSSA-201ENST00000298130 SEC11AP67812 179 aa18.68■□□□□ 0.58
SPTSSA-201ENST00000298130 AP1S3Q96PC3 154 aa18.68■□□□□ 0.58
SPTSSA-201ENST00000298130 TMEM160Q9NX00 188 aa18.67■□□□□ 0.58
SPTSSA-201ENST00000298130 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.67■□□□□ 0.58
SPTSSA-201ENST00000298130 EEF1AKMT3Q96AZ1 226 aa18.67■□□□□ 0.58
SPTSSA-201ENST00000298130 C16orf92Q96LL3 132 aa18.67■□□□□ 0.58
SPTSSA-201ENST00000298130 VPS25Q9BRG1 176 aa18.67■□□□□ 0.58
SPTSSA-201ENST00000298130 IGHV7-4-1A0A0J9YVY3 117 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 SAP30O75446 220 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 CDKN1BP46527 198 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 EFNA4P52798 201 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 LMO4P61968 165 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 SPANXN1Q5VSR9 72 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 OR2K2Q8NGT1 345 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 DEFB104AQ8WTQ1 72 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 C20orf173Q96LM9 149 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 KLK15Q9H2R5 256 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 HHLA3Q9XRX5 114 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 GCSHP23434 173 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 UNQ9165/PRO28630Q6UXU0 137 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 LCNL1Q6ZST4 164 aa18.66■□□□□ 0.58
SPTSSA-201ENST00000298130 NPFFO15130 113 aa18.65■□□□□ 0.58
SPTSSA-201ENST00000298130 SLC50A1Q9BRV3 221 aa18.65■□□□□ 0.58
SPTSSA-201ENST00000298130 PPBPP02775 128 aa18.65■□□□□ 0.58
SPTSSA-201ENST00000298130 TRAV40A0A0B4J280 105 aa18.64■□□□□ 0.58
SPTSSA-201ENST00000298130 IGHV3-11P01762 117 aa18.64■□□□□ 0.58
SPTSSA-201ENST00000298130 HSD52Q0P140 79 aa18.64■□□□□ 0.58
SPTSSA-201ENST00000298130 ARL6IP6Q8N6S5 226 aa18.64■□□□□ 0.58
SPTSSA-201ENST00000298130 DPF1Q92782 380 aa18.64■□□□□ 0.58
SPTSSA-201ENST00000298130 ABCA2Q9BZC7 2435 aa18.64■□□□□ 0.58
SPTSSA-201ENST00000298130 TMEM8BA6NDV4 472 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 K7ERJ3 54 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 SMIM17P0DL12 118 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 ZC2HC1BQ5TFG8 222 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 GLMPQ8WWB7 406 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 A0A0G2JLM5 398 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 C19orf84I3L1E1 186 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 LY6EQ16553 131 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 C5orf56Q8N8D9 126 aa18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 NXT2Q9NPJ8 142 aaKnown RBP18.64■□□□□ 0.57
SPTSSA-201ENST00000298130 A6NDN8 102 aa18.63■□□□□ 0.57
SPTSSA-201ENST00000298130 C9orf118A6NHY6 69 aa18.63■□□□□ 0.57
SPTSSA-201ENST00000298130 ATP5G2Q06055 141 aa18.63■□□□□ 0.57
SPTSSA-201ENST00000298130 M0R381 172 aa18.63■□□□□ 0.57
SPTSSA-201ENST00000298130 FXYD2P54710 66 aa18.63■□□□□ 0.57
SPTSSA-201ENST00000298130 RPL11P62913 178 aaKnown RBP18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 OR9G4Q8NGQ1 327 aa18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 MRPL35Q9NZE8 188 aaKnown RBP18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 CSMD2Q7Z408 3487 aa18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 IGLV2-18A0A075B6J9 118 aa18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 F6UB75 175 aa18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 IGKCP01834 107 aa18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 ITPR1Q14643 2758 aa18.62■□□□□ 0.57
SPTSSA-201ENST00000298130 H3BRM9 83 aa18.61■□□□□ 0.57
SPTSSA-201ENST00000298130 CELSR2Q9HCU4 2923 aa18.61■□□□□ 0.57
SPTSSA-201ENST00000298130 Q8N8P6 123 aa18.61■□□□□ 0.57
SPTSSA-201ENST00000298130 NRACQ8N912 160 aa18.61■□□□□ 0.57
SPTSSA-201ENST00000298130 RBAKDNA6NC62 111 aa18.6■□□□□ 0.57
SPTSSA-201ENST00000298130 SRSF2Q01130 221 aaKnown RBP18.6■□□□□ 0.57
SPTSSA-201ENST00000298130 RAB9AP51151 201 aa18.6■□□□□ 0.57
SPTSSA-201ENST00000298130 TRAV41A0A0B4J266 112 aa18.59■□□□□ 0.57
SPTSSA-201ENST00000298130 S100A7P31151 101 aa18.59■□□□□ 0.57
SPTSSA-201ENST00000298130 CSPG4Q6UVK1 2322 aa18.59■□□□□ 0.57
SPTSSA-201ENST00000298130 SRD5A1P18405 259 aa18.59■□□□□ 0.57
SPTSSA-201ENST00000298130 SMIM15Q7Z3B0 74 aa18.59■□□□□ 0.57
SPTSSA-201ENST00000298130 OR4X2Q8NGF9 303 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms