RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 SMDT1Q9H4I9 107 aa20.2■□□□□ 0.82
CHCHD4-201ENST00000295767 TAS2R60P59551 318 aa20.19■□□□□ 0.82
CHCHD4-201ENST00000295767 ZFP30Q9Y2G7 519 aa20.19■□□□□ 0.82
CHCHD4-201ENST00000295767 C7orf71A4D174 169 aa20.18■□□□□ 0.82
CHCHD4-201ENST00000295767 RNASE4P34096 147 aaKnown RBP20.18■□□□□ 0.82
CHCHD4-201ENST00000295767 RETNQ9HD89 108 aa20.18■□□□□ 0.82
CHCHD4-201ENST00000295767 ZNF674Q2M3X9 581 aa20.17■□□□□ 0.82
CHCHD4-201ENST00000295767 CENPWQ5EE01 88 aa20.17■□□□□ 0.82
CHCHD4-201ENST00000295767 C1orf158Q8N1D5 194 aa20.17■□□□□ 0.82
CHCHD4-201ENST00000295767 TM2D3Q9BRN9 247 aa20.17■□□□□ 0.82
CHCHD4-201ENST00000295767 PRKDCP78527 4128 aaKnown RBP20.17■□□□□ 0.82
CHCHD4-201ENST00000295767 TRBV20OR9-2A0A075B6H5 130 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 TRAV12-3A0A0B4J271 114 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 LINC00862A6NCI5 91 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 BAGE2Q86Y30 109 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 NHLRC2Q8NBF2 726 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 RNF183Q96D59 192 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 RCHY1Q96PM5 261 aa20.16■□□□□ 0.82
CHCHD4-201ENST00000295767 SMUG1Q53HV7 270 aa20.15■□□□□ 0.82
CHCHD4-201ENST00000295767 Q6ZQT7 251 aa20.15■□□□□ 0.82
CHCHD4-201ENST00000295767 COMMD7Q86VX2 200 aa20.15■□□□□ 0.82
CHCHD4-201ENST00000295767 TMEM183AQ8IXX5 376 aa20.15■□□□□ 0.82
CHCHD4-201ENST00000295767 NBEAL2Q6ZNJ1 2754 aa20.15■□□□□ 0.82
CHCHD4-201ENST00000295767 IGHV3OR16-12A0A075B7B8 117 aa20.14■□□□□ 0.81
CHCHD4-201ENST00000295767 GCGP01275 180 aa20.14■□□□□ 0.81
CHCHD4-201ENST00000295767 ZNF80P51504 273 aaPredicted RBP20.14■□□□□ 0.81
CHCHD4-201ENST00000295767 ZC2HC1AQ96GY0 325 aa20.14■□□□□ 0.81
CHCHD4-201ENST00000295767 SPRY2O43597 315 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 ZNF324O75467 553 aaPredicted RBP20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 GNG4P50150 75 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 Q6AWC8 147 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 ZNF705AQ6ZN79 300 aaPredicted RBP20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 COX8CQ7Z4L0 72 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 C20orf144Q9BQM9 153 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 SPATA25Q9BR10 227 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 OVOL2Q9BRP0 275 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 MLST8Q9BVC4 326 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 TP53TG1Q9Y2A0 90 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 GOLT1BQ9Y3E0 138 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 NIPSNAP3BQ9BS92 247 aa20.13■□□□□ 0.81
CHCHD4-201ENST00000295767 PGPEP1LA6NFU8 196 aa20.12■□□□□ 0.81
CHCHD4-201ENST00000295767 IGLV2-8P01709 118 aa20.12■□□□□ 0.81
CHCHD4-201ENST00000295767 SMIM7Q9BQ49 75 aa20.12■□□□□ 0.81
CHCHD4-201ENST00000295767 TMEM208Q9BTX3 173 aa20.12■□□□□ 0.81
CHCHD4-201ENST00000295767 C9JCJ5 164 aa20.11■□□□□ 0.81
CHCHD4-201ENST00000295767 TMEM256Q8N2U0 113 aa20.11■□□□□ 0.81
CHCHD4-201ENST00000295767 ZNF727A8MUV8 499 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 UQCC3Q6UW78 93 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 OR11H2Q8NH07 326 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 LINC01587Q99440 93 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 X6R8D5 127 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 TRAV21A0A0B4J279 112 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 CRIP1P50238 77 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 SMIM12Q96EX1 92 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 ZMAT4Q9H898 229 aa20.09■□□□□ 0.81
CHCHD4-201ENST00000295767 H7BYZ3 331 aa20.08■□□□□ 0.8
CHCHD4-201ENST00000295767 PFN1P07737 140 aaKnown RBP20.08■□□□□ 0.8
CHCHD4-201ENST00000295767 SFTA3P0C7M3 94 aa20.08■□□□□ 0.8
CHCHD4-201ENST00000295767 EIF4E3Q8N5X7 224 aaKnown RBP20.08■□□□□ 0.8
CHCHD4-201ENST00000295767 DNAH9Q9NYC9 4486 aa20.06■□□□□ 0.8
CHCHD4-201ENST00000295767 PRM2P04554 102 aa20.06■□□□□ 0.8
CHCHD4-201ENST00000295767 MGST1P10620 155 aaKnown RBP20.06■□□□□ 0.8
CHCHD4-201ENST00000295767 SOHLH1Q5JUK2 328 aa20.06■□□□□ 0.8
CHCHD4-201ENST00000295767 TENM3Q9P273 2699 aa20.06■□□□□ 0.8
CHCHD4-201ENST00000295767 FAM74A3Q4VXF1 159 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 MUC21Q5SSG8 566 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 PRR27Q6MZM9 219 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 OCC1Q8TAD7 63 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 PYGO2Q9BRQ0 406 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 FABP5P3A8MUU1 101 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 SH2D1AO60880 128 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 HTN1P15515 57 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 FAM162BQ5T6X4 162 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 C11orf21Q9P2W6 132 aa20.05■□□□□ 0.8
CHCHD4-201ENST00000295767 COL7A1Q02388 2944 aa20.04■□□□□ 0.8
CHCHD4-201ENST00000295767 ZNF705GA8MUZ8 300 aaPredicted RBP20.04■□□□□ 0.8
CHCHD4-201ENST00000295767 NHLRC4P0CG21 123 aaPredicted RBP20.04■□□□□ 0.8
CHCHD4-201ENST00000295767 NEU1Q99519 415 aa20.04■□□□□ 0.8
CHCHD4-201ENST00000295767 NAGKQ9UJ70 344 aa20.04■□□□□ 0.8
CHCHD4-201ENST00000295767 K7EN84 100 aa20.03■□□□□ 0.8
CHCHD4-201ENST00000295767 IGHV1OR15-1A0A075B7D0 117 aa20.02■□□□□ 0.8
CHCHD4-201ENST00000295767 OR5I1Q13606 314 aa20.02■□□□□ 0.79
CHCHD4-201ENST00000295767 LINC00467Q9BRT7 94 aa20.02■□□□□ 0.79
CHCHD4-201ENST00000295767 LY96Q9Y6Y9 160 aa20.02■□□□□ 0.79
CHCHD4-201ENST00000295767 HUWE1Q7Z6Z7 4374 aaKnown RBP20.01■□□□□ 0.79
CHCHD4-201ENST00000295767 SMIM9A6NGZ8 99 aa20.01■□□□□ 0.79
CHCHD4-201ENST00000295767 AZU1P20160 251 aa20.01■□□□□ 0.79
CHCHD4-201ENST00000295767 RRN3P1Q2M238 152 aa20.01■□□□□ 0.79
CHCHD4-201ENST00000295767 ANXA2RQ3ZCQ2 193 aa20.01■□□□□ 0.79
CHCHD4-201ENST00000295767 FAM159AQ6UWV7 190 aa20.01■□□□□ 0.79
CHCHD4-201ENST00000295767 MIFP14174 115 aa20■□□□□ 0.79
CHCHD4-201ENST00000295767 TMEM241Q24JQ0 296 aa20■□□□□ 0.79
CHCHD4-201ENST00000295767 LINC01551Q86U37 167 aa20■□□□□ 0.79
CHCHD4-201ENST00000295767 Q8NAQ8 132 aa20■□□□□ 0.79
CHCHD4-201ENST00000295767 TP53TG3Q9ULZ0 132 aa20■□□□□ 0.79
CHCHD4-201ENST00000295767 TDRG1Q3Y452 100 aa19.99■□□□□ 0.79
CHCHD4-201ENST00000295767 NAT8Q9UHE5 227 aa19.99■□□□□ 0.79
CHCHD4-201ENST00000295767 IGHV4-28A0A0C4DH34 117 aa19.98■□□□□ 0.79
CHCHD4-201ENST00000295767 TMEM218A2RU14 115 aa19.98■□□□□ 0.79
CHCHD4-201ENST00000295767 BIN3Q9NQY0 253 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms