RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF664Q8N3J9 261 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 PRSS47A8MTI9 375 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 IGLC2P0DOY2 106 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 IGLC3P0DOY3 106 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 PAX9P55771 341 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 RHOHQ15669 191 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 F8VRH5 84 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 ANGP03950 147 aaKnown RBP7.06□□□□□ -1.28
NIPBL-201ENST00000282516 TIRAPP58753 221 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 KLK9Q9UKQ9 250 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 DENND4CQ5VZ89 1909 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 CRYGSP22914 178 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 CFHR1Q03591 330 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 FOXF2Q12947 444 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 YPEL3P61236 119 aaPredicted RBP7.06□□□□□ -1.28
NIPBL-201ENST00000282516 SLC25A29Q8N8R3 303 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 SIPA1L1O43166 1804 aa7.06□□□□□ -1.28
NIPBL-201ENST00000282516 NDUFS6O75380 124 aaKnown RBP7.05□□□□□ -1.28
NIPBL-201ENST00000282516 SPACA3Q8IXA5 215 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 C8orf49Q96NF6 230 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 IGKV1D-8A0A087WSZ0 117 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 SPINK13Q1W4C9 94 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 ZCCHC24Q8N2G6 241 aaKnown RBP7.05□□□□□ -1.28
NIPBL-201ENST00000282516 TRAV3A0A0B4J244 114 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 K7ERJ3 54 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 MRPL51Q4U2R6 128 aaKnown RBP7.05□□□□□ -1.28
NIPBL-201ENST00000282516 PROP1O75360 226 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 SAA4P35542 130 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 TMEM213A2RRL7 107 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 GAFA1Q96PS6 74 aa7.05□□□□□ -1.28
NIPBL-201ENST00000282516 C15orf62A8K5M9 175 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 LHFPL1Q86WI0 220 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 IGLV3-12A0A075B6K2 115 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 NTF4P34130 210 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 SIVA1O15304 175 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
NIPBL-201ENST00000282516 FAM110DQ8TAY7 271 aaPredicted RBP7.04□□□□□ -1.28
NIPBL-201ENST00000282516 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 BAALC-AS2P0C853 105 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 IGLV3-19P01714 112 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 EIF4EBP2Q13542 120 aaPredicted RBP7.04□□□□□ -1.28
NIPBL-201ENST00000282516 IGFL4Q6B9Z1 124 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 CD177Q8N6Q3 437 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 K7EMI3 77 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 CSRP1P21291 193 aaKnown RBP7.04□□□□□ -1.28
NIPBL-201ENST00000282516 IGFBPL1Q8WX77 278 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 VSIG2Q96IQ7 327 aa7.04□□□□□ -1.28
NIPBL-201ENST00000282516 K7ERS5 55 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 C8orf86Q6ZUL3 223 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 CYTL1Q9NRR1 136 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 MRPL36Q9P0J6 103 aaKnown RBP7.03□□□□□ -1.28
NIPBL-201ENST00000282516 Q6ZS49 121 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 LGALS9BQ3B8N2 356 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 LGALS9CQ6DKI2 356 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 LYL1P12980 280 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 MST1LQ2TV78 715 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 PRB1P04280 392 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 TMEM14BQ9NUH8 114 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 PYGO2Q9BRQ0 406 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 ZFYVE26Q68DK2 2539 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 LINC00473A8K010 186 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 PAQR4Q8N4S7 273 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-201ENST00000282516 ZNF503Q96F45 646 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 TGFBR3LH3BV60 316 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 J3QRE1 110 aa7.03□□□□□ -1.28
NIPBL-201ENST00000282516 SIP14410 1827 aa7.02□□□□□ -1.28
NIPBL-201ENST00000282516 HERV-K104P63124 156 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 SH2D6Q7Z4S9 175 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 XCL1P47992 114 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 TLN2Q9Y4G6 2542 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 NLRC5Q86WI3 1866 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV1-27A0A075B6S5 117 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 PSMB8P28062 276 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 SS18L2Q9UHA2 77 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 TRBV19A0A075B6N1 114 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 MUSTN1Q8IVN3 82 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 IGF2BP2-AS1Q96M15 143 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 PLXNA4Q9HCM2 1894 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 SMIM27A0A1W2PRY6 76 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 IGKV2D-24A0A075B6R9 120 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 H3BMG7 143 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 ZNF493Q6ZR52 646 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 NDUFA4O00483 81 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
NIPBL-201ENST00000282516 TRAV26-2A0A0B4J265 109 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 LY6DQ14210 128 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 REG4Q9BYZ8 158 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 TAX1BP3O14907 124 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 EPOPA6NHQ4 379 aa7.01□□□□□ -1.29
NIPBL-201ENST00000282516 MRPL35Q9NZE8 188 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms