RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
CACNA1B-201ENST00000277549 CEP290O15078 2479 aa16.09■□□□□ 0.17
CACNA1B-201ENST00000277549 HERVK_113P63121 156 aa16.09■□□□□ 0.17
CACNA1B-201ENST00000277549 RNF183Q96D59 192 aa16.08■□□□□ 0.17
CACNA1B-201ENST00000277549 IGKV2-24A0A0C4DH68 120 aa16.08■□□□□ 0.17
CACNA1B-201ENST00000277549 CYTL1Q9NRR1 136 aa16.08■□□□□ 0.17
CACNA1B-201ENST00000277549 WIPF2Q8TF74 440 aaPredicted RBP16.08■□□□□ 0.16
CACNA1B-201ENST00000277549 IGHV4-61A0A0C4DH41 118 aa16.08■□□□□ 0.16
CACNA1B-201ENST00000277549 COX7B2Q8TF08 81 aa16.08■□□□□ 0.16
CACNA1B-201ENST00000277549 NDUFA4L2Q9NRX3 87 aa16.08■□□□□ 0.16
CACNA1B-201ENST00000277549 MYO7BQ6PIF6 2116 aa16.08■□□□□ 0.16
CACNA1B-201ENST00000277549 SPART-AS1P0CW21 52 aa16.07■□□□□ 0.16
CACNA1B-201ENST00000277549 AMTNQ6UX39 209 aa16.07■□□□□ 0.16
CACNA1B-201ENST00000277549 NRXN2Q9P2S2 1712 aa16.07■□□□□ 0.16
CACNA1B-201ENST00000277549 CITED1Q99966 193 aa16.07■□□□□ 0.16
CACNA1B-201ENST00000277549 ARFGEF3Q5TH69 2177 aa16.07■□□□□ 0.16
CACNA1B-201ENST00000277549 Q9H8V8 135 aa16.07■□□□□ 0.16
CACNA1B-201ENST00000277549 TRIOBPQ9H2D6 2365 aa16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 ZC2HC1AQ96GY0 325 aa16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 SRSF8Q9BRL6 282 aaKnown RBP16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 DOPEY2Q9Y3R5 2298 aa16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 MRPL52Q86TS9 123 aaKnown RBP16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 H3BRN7 92 aa16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 A0A096LNI7 61 aa16.06■□□□□ 0.16
CACNA1B-201ENST00000277549 TRAV13-2A0A0B4J235 113 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 K7EMI3 77 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 LINC01559Q495D7 138 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 FAM231BA6NCW3 169 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 FAM104BQ5XKR9 115 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 IGHV4OR15-8A0A075B7B6 117 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 A0A087WW49 117 aa16.05■□□□□ 0.16
CACNA1B-201ENST00000277549 IGHV2-5P01817 119 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 H0Y9J4 135 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 YPEL3P61236 119 aaPredicted RBP16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 PDE6HQ13956 83 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 WDR90Q96KV7 1748 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 ARID2Q68CP9 1835 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 SPRNQ5BIV9 151 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 CACNA1IQ9P0X4 2223 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 C1orf194Q5T5A4 169 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 FOXI2Q6ZQN5 318 aa16.04■□□□□ 0.16
CACNA1B-201ENST00000277549 ELANEP08246 267 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 CRYBA4P53673 196 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 SCN10AQ9Y5Y9 1956 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 NPYP01303 97 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 BLCAPP62952 87 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 PRR25Q96S07 402 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 RBM3P98179 157 aaKnown RBP16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 DYNAPQ8N1N2 210 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 CHD3Q12873 2000 aaKnown RBP16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 ATP6V0E2Q8NHE4 81 aa16.03■□□□□ 0.16
CACNA1B-201ENST00000277549 TP53BP1Q12888 1972 aaPredicted RBP16.02■□□□□ 0.16
CACNA1B-201ENST00000277549 A8MWP6 167 aa16.02■□□□□ 0.16
CACNA1B-201ENST00000277549 ATP5G1P05496 136 aa16.02■□□□□ 0.16
CACNA1B-201ENST00000277549 K7EQD1 137 aa16.02■□□□□ 0.15
CACNA1B-201ENST00000277549 MRPL35Q9NZE8 188 aaKnown RBP16.02■□□□□ 0.15
CACNA1B-201ENST00000277549 KLF2Q9Y5W3 355 aaPredicted RBP16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 DAND5Q8N907 189 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 LHFPL1Q86WI0 220 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 GFRA4Q9GZZ7 299 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 POLEQ07864 2286 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 IGKV1-6A0A0C4DH72 117 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 MRPL23Q16540 153 aaKnown RBP16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 VOPP1Q96AW1 172 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 LOC105371267A0A1B0GV96 52 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 SLAQ13239 276 aa16.01■□□□□ 0.15
CACNA1B-201ENST00000277549 M0R2N4 97 aa16■□□□□ 0.15
CACNA1B-201ENST00000277549 CSRP3P50461 194 aa16■□□□□ 0.15
CACNA1B-201ENST00000277549 LYPD6BQ8NI32 183 aa15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 C16orf74Q96GX8 76 aa15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 MRPL36Q9P0J6 103 aaKnown RBP15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 COX7A2LO14548 114 aa15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 SPTA1P02549 2419 aa15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 WT1-ASQ06250 92 aa15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 SIGLEC8Q9NYZ4 499 aa15.99■□□□□ 0.15
CACNA1B-201ENST00000277549 FAM110AQ9BQ89 295 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 ORMDL1Q9P0S3 153 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 FAM215AQ9Y5M1 114 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 NDUFB1O75438 58 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 ALPK2Q86TB3 2170 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 TICRRQ7Z2Z1 1910 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 IGHG2P01859 326 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 Q8TCH9 128 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 RPL39LQ96EH5 51 aaKnown RBP15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 GATA1P15976 413 aaPredicted RBP15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 HIGD2BQ4VC39 106 aa15.98■□□□□ 0.15
CACNA1B-201ENST00000277549 DKK2Q9UBU2 259 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 C17orf82Q86X59 251 aaPredicted RBP15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 RITA1Q96K30 269 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 LRRK1Q38SD2 2015 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 SLC25A29Q8N8R3 303 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 J3QQQ9 107 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 SMAD5-AS1Q9Y6J3 95 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 CACNA1BQ00975 2339 aa15.97■□□□□ 0.15
CACNA1B-201ENST00000277549 HHLA3Q9XRX5 114 aa15.96■□□□□ 0.15
CACNA1B-201ENST00000277549 FUSP35637 526 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNA1B-201ENST00000277549 KLK12Q9UKR0 248 aa15.96■□□□□ 0.15
CACNA1B-201ENST00000277549 BAALC-AS2P0C853 105 aa15.96■□□□□ 0.15
CACNA1B-201ENST00000277549 DOCK7Q96N67 2140 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms