RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 RBMY1CP0DJD4 496 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 DEFB130BP0DP73 79 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 DEFB130AP0DP74 79 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 SCGB1A1P11684 91 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 VWC2Q2TAL6 325 aa12.17□□□□□ -0.46
TIMP3-201ENST00000266085 RHODO00212 210 aa12.16□□□□□ -0.46
TIMP3-201ENST00000266085 MORN3Q6PF18 240 aaPredicted RBP12.16□□□□□ -0.46
TIMP3-201ENST00000266085 GUSBP1Q15486 140 aa12.16□□□□□ -0.46
TIMP3-201ENST00000266085 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
TIMP3-201ENST00000266085 ABCA12Q86UK0 2595 aa12.16□□□□□ -0.46
TIMP3-201ENST00000266085 hDV102S1A0JD36 115 aa12.16□□□□□ -0.46
TIMP3-201ENST00000266085 C10orf91Q5T1B1 145 aa12.16□□□□□ -0.46
TIMP3-201ENST00000266085 CDKN1BP46527 198 aa12.15□□□□□ -0.46
TIMP3-201ENST00000266085 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
TIMP3-201ENST00000266085 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.46
TIMP3-201ENST00000266085 DSCAMO60469 2012 aa12.15□□□□□ -0.46
TIMP3-201ENST00000266085 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
TIMP3-201ENST00000266085 IGHV7-4-1A0A0J9YVY3 117 aa12.15□□□□□ -0.46
TIMP3-201ENST00000266085 KNCNA6PVL3 124 aa12.15□□□□□ -0.46
TIMP3-201ENST00000266085 BLCAPP62952 87 aa12.15□□□□□ -0.46
TIMP3-201ENST00000266085 TMEM95Q3KNT9 176 aa12.15□□□□□ -0.47
TIMP3-201ENST00000266085 C22orf34Q6ZV56 151 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 FASNP49327 2511 aaKnown RBP12.14□□□□□ -0.47
TIMP3-201ENST00000266085 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
TIMP3-201ENST00000266085 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 IGHV7-81A0A0B4J1V7 117 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 TMEM238C9JI98 176 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
TIMP3-201ENST00000266085 TMEM86BQ8N661 226 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 RITA1Q96K30 269 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 NCKAP5O14513 1909 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 KLK9Q9UKQ9 250 aa12.14□□□□□ -0.47
TIMP3-201ENST00000266085 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
TIMP3-201ENST00000266085 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
TIMP3-201ENST00000266085 IGLV1-47P01700 117 aa12.13□□□□□ -0.47
TIMP3-201ENST00000266085 A0A1B0GUS0 222 aa12.13□□□□□ -0.47
TIMP3-201ENST00000266085 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
TIMP3-201ENST00000266085 MCRIP2Q9BUT9 160 aaKnown RBP12.13□□□□□ -0.47
TIMP3-201ENST00000266085 PLXNB1O43157 2135 aa12.13□□□□□ -0.47
TIMP3-201ENST00000266085 ANXA2RQ3ZCQ2 193 aa12.12□□□□□ -0.47
TIMP3-201ENST00000266085 VGLL1Q99990 258 aa12.12□□□□□ -0.47
TIMP3-201ENST00000266085 LINC00158P58513 81 aa12.12□□□□□ -0.47
TIMP3-201ENST00000266085 NPBQ8NG41 125 aa12.12□□□□□ -0.47
TIMP3-201ENST00000266085 ZNF479Q96JC4 524 aa12.12□□□□□ -0.47
TIMP3-201ENST00000266085 TRAV12-2A0A075B6T6 113 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 IGKV1-17P01599 117 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 SLAQ13239 276 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 PRSS57Q6UWY2 283 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 BCL6BQ8N143 479 aaPredicted RBP12.11□□□□□ -0.47
TIMP3-201ENST00000266085 C17orf77Q96MU5 243 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 PRORYQ9H606 182 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 SMIM27A0A1W2PRY6 76 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 CKS1BP61024 79 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
TIMP3-201ENST00000266085 TRAV13-1A0A0B4J241 112 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 K7EIM0 57 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 Q8N7P7 452 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 A8MWV9 139 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 PAX2Q02962 417 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 C21orf62-AS1Q17RA5 79 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 RASL10AQ92737 203 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
TIMP3-201ENST00000266085 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
TIMP3-201ENST00000266085 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
TIMP3-201ENST00000266085 ZNF664Q8N3J9 261 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 ATP6V0BQ99437 205 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 I3L2K1 104 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 HLA-DMBP28068 263 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 Q8N9W7 124 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 ZNF462Q96JM2 2506 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 NDUFS6O75380 124 aaKnown RBP12.09□□□□□ -0.47
TIMP3-201ENST00000266085 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 UTRNP46939 3433 aa12.09□□□□□ -0.47
TIMP3-201ENST00000266085 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 GHRHP01286 108 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
TIMP3-201ENST00000266085 SLC25A20O43772 301 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 PLA2G5P39877 138 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 A0A087X0K7 114 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 C6orf226Q5I0X4 101 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 AGPAT4-IT1Q9H0P7 198 aa12.08□□□□□ -0.48
TIMP3-201ENST00000266085 TTC32Q5I0X7 151 aa12.07□□□□□ -0.48
TIMP3-201ENST00000266085 Q8N8P6 123 aa12.07□□□□□ -0.48
TIMP3-201ENST00000266085 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
TIMP3-201ENST00000266085 C19orf84I3L1E1 186 aa12.07□□□□□ -0.48
TIMP3-201ENST00000266085 LTAP01374 205 aa12.07□□□□□ -0.48
TIMP3-201ENST00000266085 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
TIMP3-201ENST00000266085 ASPHD1Q5U4P2 390 aa12.07□□□□□ -0.48
TIMP3-201ENST00000266085 IGHV3-16A0A0C4DH30 117 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 F6UB75 175 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 M0R2P5 195 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms