RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 E7EUB6 86 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-201ENST00000264555 DYNAPQ8N1N2 210 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 Q8N7P7 452 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 UBE2E2Q96LR5 201 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 CEP192Q8TEP8 1941 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 CFAP161Q6P656 301 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 NCKAP5O14513 1909 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 HLA-DMBP28068 263 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 DAZAP2Q15038 168 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-201ENST00000264555 TCTEX1D4Q5JR98 221 aa13.12□□□□□ -0.31
PHRF1-201ENST00000264555 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 CTSGP08311 255 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 CDKN1BP46527 198 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 AGPAT4-IT1Q9H0P7 198 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 CRYGCP07315 174 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 NPYP01303 97 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 RPL35AP18077 110 aaKnown RBP13.11□□□□□ -0.31
PHRF1-201ENST00000264555 C2orf66Q6UXQ4 117 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 Q8N9W7 124 aa13.11□□□□□ -0.31
PHRF1-201ENST00000264555 CD5LO43866 347 aa13.1□□□□□ -0.31
PHRF1-201ENST00000264555 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-201ENST00000264555 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
PHRF1-201ENST00000264555 EIF4EBP1Q13541 118 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-201ENST00000264555 ZNF295-AS1Q8N0V1 137 aa13.1□□□□□ -0.31
PHRF1-201ENST00000264555 KMT2EQ8IZD2 1858 aa13.1□□□□□ -0.31
PHRF1-201ENST00000264555 DEFB112Q30KQ8 113 aa13.1□□□□□ -0.31
PHRF1-201ENST00000264555 SNHG12Q9BXW3 62 aa13.1□□□□□ -0.31
PHRF1-201ENST00000264555 LRP4O75096 1905 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 LGALS9BQ3B8N2 356 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 LGALS9CQ6DKI2 356 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 RHODO00212 210 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
PHRF1-201ENST00000264555 KLK9Q9UKQ9 250 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 ZFP36P26651 326 aaKnown RBP13.09□□□□□ -0.31
PHRF1-201ENST00000264555 CHAC1Q9BUX1 264 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 OTOGLQ3ZCN5 2332 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
PHRF1-201ENST00000264555 TRAV26-2A0A0B4J265 109 aa13.08□□□□□ -0.31
PHRF1-201ENST00000264555 IGHV3-53P01767 116 aa13.08□□□□□ -0.31
PHRF1-201ENST00000264555 TP53TG1Q9Y2A0 90 aa13.08□□□□□ -0.31
PHRF1-201ENST00000264555 TRBV7-9A0A0J9YWB2 115 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 RNASE1P07998 156 aaKnown RBP13.08□□□□□ -0.32
PHRF1-201ENST00000264555 ANKHD1Q8IWZ3 2542 aaKnown RBP13.08□□□□□ -0.32
PHRF1-201ENST00000264555 WI2-2373I1.2A0A1W2PRP0 233 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 IGHV4-59P01825 116 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 MALP21145 153 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 TMEM141Q96I45 108 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
PHRF1-201ENST00000264555 IGLL1P15814 213 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 KIR3DS1Q14943 382 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 RNF114Q9Y508 228 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 IGHV4-30-2A0A087WSY4 118 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
PHRF1-201ENST00000264555 TSPAN13O95857 204 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 C22orf34Q6ZV56 151 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
PHRF1-201ENST00000264555 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
PHRF1-201ENST00000264555 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
PHRF1-201ENST00000264555 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
PHRF1-201ENST00000264555 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
PHRF1-201ENST00000264555 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
PHRF1-201ENST00000264555 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
PHRF1-201ENST00000264555 IGHV4-38-2P0DP08 117 aa13.07□□□□□ -0.32
PHRF1-201ENST00000264555 UBE2V1Q13404 147 aa13.07□□□□□ -0.32
PHRF1-201ENST00000264555 LY6G5BQ8NDX9 201 aa13.07□□□□□ -0.32
PHRF1-201ENST00000264555 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
PHRF1-201ENST00000264555 ZNF124Q15973 351 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 SMIM2Q9BVW6 85 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 ESDP10768 282 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 ATP6V0BQ99437 205 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 C10orf126Q8N4M7 172 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 A8MWV9 139 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 C5orf56Q8N8D9 126 aa13.06□□□□□ -0.32
PHRF1-201ENST00000264555 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 UTF1Q5T230 341 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 BUB3O43684 328 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 I3L3M4 83 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 LURAP1LQ8IV03 231 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 C20orf78Q9BR46 151 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 CFHR4Q92496 578 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 RASL10AQ92737 203 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 MEGF9Q9H1U4 602 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 COX11Q9Y6N1 276 aa13.05□□□□□ -0.32
PHRF1-201ENST00000264555 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
PHRF1-201ENST00000264555 SIRPDQ9H106 197 aa13.04□□□□□ -0.32
PHRF1-201ENST00000264555 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
PHRF1-201ENST00000264555 PAX2Q02962 417 aa13.04□□□□□ -0.32
PHRF1-201ENST00000264555 COX8AP10176 69 aa13.04□□□□□ -0.32
PHRF1-201ENST00000264555 PMVKQ15126 192 aa13.04□□□□□ -0.32
PHRF1-201ENST00000264555 C1orf229Q6ZS94 237 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms