RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 LOC102724200A0A096LPH7 203 aaPredicted RBP10.92□□□□□ -0.66
CDH1-201ENST00000261769 C6orf226Q5I0X4 101 aa10.92□□□□□ -0.66
CDH1-201ENST00000261769 SSBP2P81877 361 aaPredicted RBP10.91□□□□□ -0.66
CDH1-201ENST00000261769 PRR20EP86478 221 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 PRR20CP86479 221 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 PRR20DP86480 221 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 PRR20BP86481 221 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 PRR20AP86496 221 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 ANXA2RQ3ZCQ2 193 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 BCL6BQ8N143 479 aaPredicted RBP10.91□□□□□ -0.66
CDH1-201ENST00000261769 LINC00158P58513 81 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 LYPD6Q86Y78 171 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 OR2K2Q8NGT1 345 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
CDH1-201ENST00000261769 K7EMT4 169 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 SMIM13P0DJ93 91 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 PIFOQ8TCI5 191 aa10.91□□□□□ -0.66
CDH1-201ENST00000261769 K7EIM0 57 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.66
CDH1-201ENST00000261769 WNK1Q9H4A3 2382 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 ZNF106Q9H2Y7 1883 aaKnown RBP10.9□□□□□ -0.66
CDH1-201ENST00000261769 IGKCP01834 107 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 NCOA6Q14686 2063 aaPredicted RBP10.9□□□□□ -0.66
CDH1-201ENST00000261769 I3L2K1 104 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 ZNF493Q6ZR52 646 aa10.9□□□□□ -0.66
CDH1-201ENST00000261769 ALPK3Q96L96 1907 aa10.9□□□□□ -0.67
CDH1-201ENST00000261769 GAGE10A6NGK3 116 aa10.9□□□□□ -0.67
CDH1-201ENST00000261769 GPHB5Q86YW7 130 aa10.9□□□□□ -0.67
CDH1-201ENST00000261769 RNF152Q8N8N0 203 aa10.9□□□□□ -0.67
CDH1-201ENST00000261769 PRSS46E5RG02 174 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
CDH1-201ENST00000261769 AMN1Q8IY45 258 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 A0A1B0GV90 55 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 PAX4O43316 350 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 ATRAIDQ6UW56 229 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 C4orf3Q8WVX3 66 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 IGHV4OR15-8A0A075B7B6 117 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 A0A087WW49 117 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 TRAV13-1A0A0B4J241 112 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 CRYGCP07315 174 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 C8orf49Q96NF6 230 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 CTSGP08311 255 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
CDH1-201ENST00000261769 MED12LQ86YW9 2145 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 MUC22E2RYF6 1773 aaPredicted RBP10.88□□□□□ -0.67
CDH1-201ENST00000261769 IGHV3-16A0A0C4DH30 117 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 GGTLC3B5MD39 225 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
CDH1-201ENST00000261769 MEGF9Q9H1U4 602 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 ANKRD11Q6UB99 2663 aaPredicted RBP10.88□□□□□ -0.67
CDH1-201ENST00000261769 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
CDH1-201ENST00000261769 PRR14LQ5THK1 2151 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 NCKAP5O14513 1909 aa10.88□□□□□ -0.67
CDH1-201ENST00000261769 S100A7L2Q5SY68 101 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 C11orf71Q6IPW1 123 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 TMEM243Q9BU79 118 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 SMAD5-AS1Q9Y6J3 95 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 C2orf70A6NJV1 201 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 M0R2P5 195 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 IGKV1-17P01599 117 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 VWC2Q2TAL6 325 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 RITA1Q96K30 269 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 SPART-AS1P0CW21 52 aa10.87□□□□□ -0.67
CDH1-201ENST00000261769 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 RHOHQ15669 191 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 Q6YL49 198 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 ZNF815PA8K554 130 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 JPT2Q9H910 190 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 I3L3M4 83 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 HIST2H2BCQ6DN03 193 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 FAM231DQ6ZW35 169 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 TNFRSF6BO95407 300 aa10.86□□□□□ -0.67
CDH1-201ENST00000261769 INS-IGF2F8WCM5 200 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 ZNF561-AS1K7EIQ3 104 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 LINC00574Q9H8X3 128 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 ODF3BA8MYP8 253 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 C14orf144Q96I85 54 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 IGF2BP2-AS1Q96M15 143 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 TNCP24821 2201 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 NDUFA11Q86Y39 141 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 EML6Q6ZMW3 1958 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 SHISA2Q6UWI4 295 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 DYSFO75923 2080 aa10.85□□□□□ -0.67
CDH1-201ENST00000261769 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 F6UB75 175 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BKO60814 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BJP06899 126 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms