RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 C12orf54Q6X4T0 127 aa19.58■□□□□ 0.72
RAB40C-201ENST00000248139 LCNL1Q6ZST4 164 aa19.58■□□□□ 0.72
RAB40C-201ENST00000248139 ARL6IP6Q8N6S5 226 aa19.58■□□□□ 0.72
RAB40C-201ENST00000248139 PKD1L2Q7Z442 2459 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 IGKV3-7A0A075B6H7 116 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 FGF6P10767 208 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 LEPP41159 167 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 ATP5G2Q06055 141 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 UNQ9165/PRO28630Q6UXU0 137 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 DEFB125Q8N687 156 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 LINC01559Q495D7 138 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 TMEM78Q5T7P6 136 aa19.57■□□□□ 0.72
RAB40C-201ENST00000248139 TRAV40A0A0B4J280 105 aa19.56■□□□□ 0.72
RAB40C-201ENST00000248139 PCP2Q8IVA1 136 aa19.56■□□□□ 0.72
RAB40C-201ENST00000248139 MAP1LC3AQ9H492 121 aa19.56■□□□□ 0.72
RAB40C-201ENST00000248139 FBLL1A6NHQ2 334 aaKnown RBP19.56■□□□□ 0.72
RAB40C-201ENST00000248139 NMUP48645 174 aa19.56■□□□□ 0.72
RAB40C-201ENST00000248139 PRR9Q5T870 116 aa19.56■□□□□ 0.72
RAB40C-201ENST00000248139 SLC50A1Q9BRV3 221 aa19.56■□□□□ 0.72
RAB40C-201ENST00000248139 TRAV41A0A0B4J266 112 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 IGHV3-11P01762 117 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 LGALS9BQ3B8N2 356 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 AMMECR1LQ6DCA0 310 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 LGALS9CQ6DKI2 356 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 PIFOQ8TCI5 191 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 C20orf173Q96LM9 149 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 UFC1Q9Y3C8 167 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 SMAD7O15105 426 aaKnown RBP19.55■□□□□ 0.72
RAB40C-201ENST00000248139 OR4C5Q8NGB2 326 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 C16orf92Q96LL3 132 aa19.55■□□□□ 0.72
RAB40C-201ENST00000248139 TTTY13Q9BZ97 58 aa19.54■□□□□ 0.72
RAB40C-201ENST00000248139 CNFNQ9BYD5 112 aa19.54■□□□□ 0.72
RAB40C-201ENST00000248139 TRBV7-1A0A0A6YYK4 115 aa19.53■□□□□ 0.72
RAB40C-201ENST00000248139 IGHV4-61A0A0C4DH41 118 aa19.53■□□□□ 0.72
RAB40C-201ENST00000248139 NAA38Q9BRA0 125 aaKnown RBP19.53■□□□□ 0.72
RAB40C-201ENST00000248139 IGHV4-38-2P0DP08 117 aa19.52■□□□□ 0.72
RAB40C-201ENST00000248139 S100A7P31151 101 aa19.52■□□□□ 0.72
RAB40C-201ENST00000248139 RAB9AP51151 201 aa19.52■□□□□ 0.72
RAB40C-201ENST00000248139 IGHV7-4-1A0A0J9YVY3 117 aa19.51■□□□□ 0.71
RAB40C-201ENST00000248139 Q6ZS46 218 aa19.51■□□□□ 0.71
RAB40C-201ENST00000248139 TRAV8-6A0A0B4J262 113 aa19.51■□□□□ 0.71
RAB40C-201ENST00000248139 TMEM97Q5BJF2 176 aa19.51■□□□□ 0.71
RAB40C-201ENST00000248139 RBAKDNA6NC62 111 aa19.5■□□□□ 0.71
RAB40C-201ENST00000248139 TMEM158Q8WZ71 300 aa19.5■□□□□ 0.71
RAB40C-201ENST00000248139 H3BVH4 76 aa19.5■□□□□ 0.71
RAB40C-201ENST00000248139 ARL3P36405 182 aa19.5■□□□□ 0.71
RAB40C-201ENST00000248139 KLK15Q9H2R5 256 aa19.5■□□□□ 0.71
RAB40C-201ENST00000248139 MOB4Q9Y3A3 225 aa19.5■□□□□ 0.71
RAB40C-201ENST00000248139 SRSF2Q01130 221 aaKnown RBP19.49■□□□□ 0.71
RAB40C-201ENST00000248139 PRSS1P07477 247 aa19.49■□□□□ 0.71
RAB40C-201ENST00000248139 TM4SF20Q53R12 229 aa19.49■□□□□ 0.71
RAB40C-201ENST00000248139 GLMPQ8WWB7 406 aa19.49■□□□□ 0.71
RAB40C-201ENST00000248139 RPL11P62913 178 aaKnown RBP19.48■□□□□ 0.71
RAB40C-201ENST00000248139 U3KQE9 123 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 F6UB75 175 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 KIR3DS1Q14943 382 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 KLK9Q2XQG4 91 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 KLK9Q9UKQ9 250 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 IGKV2D-26A0A0A0MRZ7 120 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 IGHV1-69DA0A0B4J2H0 117 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 IGHV1-69P01742 117 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 SPANXN1Q5VSR9 72 aa19.48■□□□□ 0.71
RAB40C-201ENST00000248139 C7orf71A4D174 169 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 CD5LO43866 347 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 BLCAPP62952 87 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 BOD1L2Q8IYS8 172 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 PPBPP02775 128 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 GPHB5Q86YW7 130 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 OR2K2Q8NGT1 345 aa19.47■□□□□ 0.71
RAB40C-201ENST00000248139 USP9XQ93008 2570 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-201ENST00000248139 CENPEQ02224 2701 aa19.46■□□□□ 0.71
RAB40C-201ENST00000248139 FCER1GP30273 86 aa19.46■□□□□ 0.71
RAB40C-201ENST00000248139 SRD5A1P18405 259 aa19.46■□□□□ 0.71
RAB40C-201ENST00000248139 ZANQ9Y493 2812 aa19.45■□□□□ 0.7
RAB40C-201ENST00000248139 C9orf47Q6ZRZ4 202 aa19.45■□□□□ 0.7
RAB40C-201ENST00000248139 FOXC2Q99958 501 aa19.45■□□□□ 0.7
RAB40C-201ENST00000248139 EDN2P20800 178 aa19.45■□□□□ 0.7
RAB40C-201ENST00000248139 C21orf62-AS1Q17RA5 79 aa19.45■□□□□ 0.7
RAB40C-201ENST00000248139 ODF1Q14990 250 aa19.44■□□□□ 0.7
RAB40C-201ENST00000248139 C19orf54Q5BKX5 351 aa19.44■□□□□ 0.7
RAB40C-201ENST00000248139 H3BUX3 64 aa19.44■□□□□ 0.7
RAB40C-201ENST00000248139 NXT2Q9NPJ8 142 aaKnown RBP19.44■□□□□ 0.7
RAB40C-201ENST00000248139 DOPEY2Q9Y3R5 2298 aa19.44■□□□□ 0.7
RAB40C-201ENST00000248139 K7EP13 123 aa19.43■□□□□ 0.7
RAB40C-201ENST00000248139 M0R381 172 aa19.43■□□□□ 0.7
RAB40C-201ENST00000248139 RAB37Q96AX2 223 aa19.43■□□□□ 0.7
RAB40C-201ENST00000248139 IGLV2-18A0A075B6J9 118 aa19.43■□□□□ 0.7
RAB40C-201ENST00000248139 A1L4Q6 167 aa19.43■□□□□ 0.7
RAB40C-201ENST00000248139 NRACQ8N912 160 aa19.42■□□□□ 0.7
RAB40C-201ENST00000248139 OR1N2Q8NGR9 330 aa19.42■□□□□ 0.7
RAB40C-201ENST00000248139 POLQO75417 2590 aa19.42■□□□□ 0.7
RAB40C-201ENST00000248139 PF4V1P10720 104 aa19.42■□□□□ 0.7
RAB40C-201ENST00000248139 GTSCR1Q86UQ5 136 aa19.42■□□□□ 0.7
RAB40C-201ENST00000248139 USP9YO00507 2555 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-201ENST00000248139 WFDC12Q8WWY7 111 aa19.41■□□□□ 0.7
RAB40C-201ENST00000248139 PIEZO1Q92508 2521 aa19.41■□□□□ 0.7
RAB40C-201ENST00000248139 SMIM17P0DL12 118 aa19.41■□□□□ 0.7
RAB40C-201ENST00000248139 HHLA3Q9XRX5 114 aa19.41■□□□□ 0.7
RAB40C-201ENST00000248139 Q8N8P6 123 aa19.4■□□□□ 0.7
RAB40C-201ENST00000248139 DEFB104AQ8WTQ1 72 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms