RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 NDUFA11Q86Y39 141 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 UBE2WQ96B02 151 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 OTORQ9NRC9 128 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 COL12A1Q99715 3063 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 PCSK5Q92824 1860 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 DMXL2Q8TDJ6 3036 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 UPK2O00526 184 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 ENSAO43768 121 aaKnown RBP7.7□□□□□ -1.18
IRF1-201ENST00000245414 GATA1P15976 413 aaPredicted RBP7.7□□□□□ -1.18
IRF1-201ENST00000245414 SLC25A16P16260 332 aa7.7□□□□□ -1.18
IRF1-201ENST00000245414 WIPF1O43516 503 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 APELAP0DMC3 54 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 PEAR1Q5VY43 1037 aaPredicted RBP7.69□□□□□ -1.18
IRF1-201ENST00000245414 C6orf15Q6UXA7 325 aaPredicted RBP7.69□□□□□ -1.18
IRF1-201ENST00000245414 DMXL1Q9Y485 3027 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 SMG1Q96Q15 3661 aaKnown RBP7.69□□□□□ -1.18
IRF1-201ENST00000245414 CECR9P0C854 216 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 SAA2P0DJI9 122 aaPredicted RBP7.69□□□□□ -1.18
IRF1-201ENST00000245414 ASCL5Q7RTU5 278 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 RITA1Q96K30 269 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 U3KQK5 164 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 ZNF462Q96JM2 2506 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 IGHV3OR15-7A0A075B7D8 119 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 LMO7DNF2Z398 122 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 TIMM23O14925 209 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 CD3EP07766 207 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 RNF138Q8WVD3 245 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 C8orf49Q96NF6 230 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 PRO1854Q9UHT4 67 aa7.69□□□□□ -1.18
IRF1-201ENST00000245414 RBAKDNA6NC62 111 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 H7C1H1 209 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 CDX4O14627 284 aaPredicted RBP7.68□□□□□ -1.18
IRF1-201ENST00000245414 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 ORM1P02763 201 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 RFPL3SP0C7P2 107 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 DUX4L9Q6RFH8 374 aaPredicted RBP7.68□□□□□ -1.18
IRF1-201ENST00000245414 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 KLHL30-AS1Q8NEE0 82 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 IGKV1-16P04430 117 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 UBE2D1P51668 147 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 PAX8Q06710 450 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 TCF15Q12870 199 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 HCP5Q6MZN7 132 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 MSRB1Q9NZV6 116 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 NAV3Q8IVL0 2385 aa7.68□□□□□ -1.18
IRF1-201ENST00000245414 FLNBO75369 2602 aaKnown RBP7.68□□□□□ -1.18
IRF1-201ENST00000245414 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 SPRNQ5BIV9 151 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 C2orf82Q6UX34 121 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 MRPL20Q9BYC9 149 aaKnown RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 USP9YO00507 2555 aaPredicted RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 MRPS12O15235 138 aaKnown RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 SAA1P0DJI8 122 aaPredicted RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 SRSF2Q01130 221 aaKnown RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 C10orf55Q5SWW7 151 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 RPS19BP1Q86WX3 136 aaKnown RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 SBSPONQ8IVN8 264 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 DEFB124Q8NES8 71 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 DUX5Q96PT3 197 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 DUX3Q96PT4 197 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 JMJD1CQ15652 2540 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 WNK1Q9H4A3 2382 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 F8VRH5 84 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 C15orf65H3BRN8 121 aa7.67□□□□□ -1.18
IRF1-201ENST00000245414 MRPL36Q9P0J6 103 aaKnown RBP7.67□□□□□ -1.18
IRF1-201ENST00000245414 M0R3E3 92 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 CCL11P51671 97 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 C1orf229Q6ZS94 237 aaPredicted RBP7.66□□□□□ -1.18
IRF1-201ENST00000245414 SLC25A39Q9BZJ4 359 aaPredicted RBP7.66□□□□□ -1.18
IRF1-201ENST00000245414 POLQO75417 2590 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 LRP4O75096 1905 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 SH2D1AO60880 128 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 GP9P14770 177 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 HLA-DMBP28068 263 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 PRDX2P32119 198 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 LAGE3Q14657 143 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 ATXN8Q156A1 80 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 SCGB3A1Q96QR1 104 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 LINC00527Q9UJ94 153 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 UQCRQO14949 82 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 CRIP1P50238 77 aa7.66□□□□□ -1.18
IRF1-201ENST00000245414 RPUSD1Q9UJJ7 312 aaKnown RBP7.66□□□□□ -1.18
IRF1-201ENST00000245414 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 UTF1Q5T230 341 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 TMEM170BQ5T4T1 132 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 SLC25A45Q8N413 288 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.18
IRF1-201ENST00000245414 TM4SF5O14894 197 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 CFC1P0CG37 223 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 GGNQ86UU5 652 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 C1orf43Q9BWL3 253 aa7.65□□□□□ -1.18
IRF1-201ENST00000245414 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.19
IRF1-201ENST00000245414 TMEM219Q86XT9 240 aa7.65□□□□□ -1.19
IRF1-201ENST00000245414 ZNRF1Q8ND25 227 aa7.65□□□□□ -1.19
IRF1-201ENST00000245414 MED13Q9UHV7 2174 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms