RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 MRPL54Q6P161 138 aaKnown RBP11.38□□□□□ -0.59
HDHD3-201ENST00000238379 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
HDHD3-201ENST00000238379 SIGLEC8Q9NYZ4 499 aa11.38□□□□□ -0.59
HDHD3-201ENST00000238379 TMEM189A5PLL7 270 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BKO60814 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BJP06899 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BOP23527 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BBP33778 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BDP58876 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BCP62807 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST2H2BEQ16778 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.37□□□□□ -0.59
HDHD3-201ENST00000238379 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
HDHD3-201ENST00000238379 ZNF575Q86XF7 245 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 ZFAND2AQ8N6M9 145 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BHQ93079 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BNQ99877 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 HIST1H2BMQ99879 126 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 FABP9Q0Z7S8 132 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 CD300EQ496F6 205 aaPredicted RBP11.37□□□□□ -0.59
HDHD3-201ENST00000238379 GDF5OSQ5U4N7 250 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.37□□□□□ -0.59
HDHD3-201ENST00000238379 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
HDHD3-201ENST00000238379 SORL1Q92673 2214 aa11.36□□□□□ -0.59
HDHD3-201ENST00000238379 TRBV7-9A0A0J9YWB2 115 aa11.36□□□□□ -0.59
HDHD3-201ENST00000238379 PRR9Q5T870 116 aa11.36□□□□□ -0.59
HDHD3-201ENST00000238379 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
HDHD3-201ENST00000238379 A0A0J9YX75 114 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 A0A1B0GXF2 115 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 COX19Q49B96 90 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 RASL11AQ6T310 242 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 APRG1Q8IVJ8 170 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 C11orf21Q9P2W6 132 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 XKRY2A2RUG3 117 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 ORM1P02763 201 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 CRISP2P16562 243 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 ATP5L2Q7Z4Y8 100 aa11.35□□□□□ -0.59
HDHD3-201ENST00000238379 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
HDHD3-201ENST00000238379 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
HDHD3-201ENST00000238379 SNURFLB1AK76 121 aa11.34□□□□□ -0.59
HDHD3-201ENST00000238379 CD33P20138 364 aa11.34□□□□□ -0.59
HDHD3-201ENST00000238379 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
HDHD3-201ENST00000238379 WDR73Q6P4I2 378 aa11.34□□□□□ -0.59
HDHD3-201ENST00000238379 Q6ZQT7 251 aa11.34□□□□□ -0.59
HDHD3-201ENST00000238379 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
HDHD3-201ENST00000238379 MT-ND6P03923 174 aa11.33□□□□□ -0.6
HDHD3-201ENST00000238379 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
HDHD3-201ENST00000238379 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
HDHD3-201ENST00000238379 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
HDHD3-201ENST00000238379 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
HDHD3-201ENST00000238379 TENM1Q9UKZ4 2725 aa11.33□□□□□ -0.6
HDHD3-201ENST00000238379 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 S100A6P06703 90 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 SNRPEP62304 92 aaKnown RBP11.32□□□□□ -0.6
HDHD3-201ENST00000238379 KIR3DS1Q14943 382 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 Q6AWC8 147 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
HDHD3-201ENST00000238379 J3KRW8 73 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 GPX1P07203 203 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 DEFB131AP59861 70 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
HDHD3-201ENST00000238379 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 KLLNB2CW77 178 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 HLA-DQA1P01909 254 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 CAMPP49913 170 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 RAB4BP61018 213 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 HBBP68871 147 aa11.31□□□□□ -0.6
HDHD3-201ENST00000238379 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
HDHD3-201ENST00000238379 RNASE4P34096 147 aaKnown RBP11.3□□□□□ -0.6
HDHD3-201ENST00000238379 NDUFA6P56556 154 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 LYZL1Q6UWQ5 148 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 TPPP3Q9BW30 176 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 ATRQ13535 2644 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 SAP30O75446 220 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 IGKV3-20P01619 116 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
HDHD3-201ENST00000238379 AGRNO00468 2067 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 KNCNA6PVL3 124 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 IGLV1-51P01701 117 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 CTRLP40313 264 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 SLAQ13239 276 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 AMTNQ6UX39 209 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 LINC00482Q8N8I6 264 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 CITED1Q99966 193 aa11.29□□□□□ -0.6
HDHD3-201ENST00000238379 A8MTW9 85 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 LEPP41159 167 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 RIGQ13278 110 aa11.28□□□□□ -0.6
HDHD3-201ENST00000238379 H3BMM0 161 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms