RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 OR4C46A6NHA9 309 aa13.82□□□□□ -0.2
SNX17-201ENST00000233575 IGKV3-20P01619 116 aa13.82□□□□□ -0.2
SNX17-201ENST00000233575 RPP21Q9H633 154 aaKnown RBP13.82□□□□□ -0.2
SNX17-201ENST00000233575 STAB1Q9NY15 2570 aa13.82□□□□□ -0.2
SNX17-201ENST00000233575 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
SNX17-201ENST00000233575 ZFAND2AQ8N6M9 145 aa13.81□□□□□ -0.2
SNX17-201ENST00000233575 FAM19A4Q96LR4 140 aa13.81□□□□□ -0.2
SNX17-201ENST00000233575 SAV1Q9H4B6 383 aaPredicted RBP13.81□□□□□ -0.2
SNX17-201ENST00000233575 FAM162BQ5T6X4 162 aa13.81□□□□□ -0.2
SNX17-201ENST00000233575 APRG1Q8IVJ8 170 aa13.81□□□□□ -0.2
SNX17-201ENST00000233575 ZNF747Q9BV97 191 aa13.81□□□□□ -0.2
SNX17-201ENST00000233575 GZMBP10144 247 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 ODF3L2Q3SX64 289 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 EBLN2Q6P2I7 272 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 S100PP25815 95 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 FOXI2Q6ZQN5 318 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 OR4B1Q8NGF8 309 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 OR2D3Q8NGH3 330 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 IMMP2LQ96T52 175 aa13.8□□□□□ -0.2
SNX17-201ENST00000233575 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
SNX17-201ENST00000233575 RAB5AP20339 215 aa13.79□□□□□ -0.2
SNX17-201ENST00000233575 KCNIP4Q6PIL6 250 aa13.79□□□□□ -0.2
SNX17-201ENST00000233575 C3orf56Q8N813 242 aa13.79□□□□□ -0.2
SNX17-201ENST00000233575 LENEPQ9Y5L5 61 aa13.79□□□□□ -0.2
SNX17-201ENST00000233575 TMSB15BA0A087X1C1 80 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 TRBV24-1A0A075B6N3 115 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 SPINK4O60575 86 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 GTSF1Q8WW33 167 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 FAM210BQ96KR6 192 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 NEU1Q99519 415 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 PYGO2Q9BRQ0 406 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 C11orf21Q9P2W6 132 aa13.78□□□□□ -0.2
SNX17-201ENST00000233575 COL6A5A8TX70 2615 aa13.77□□□□□ -0.2
SNX17-201ENST00000233575 FRMD6-AS1P0C7T7 363 aa13.77□□□□□ -0.21
SNX17-201ENST00000233575 ZNF575Q86XF7 245 aa13.77□□□□□ -0.21
SNX17-201ENST00000233575 LINC00469Q8N7U9 141 aa13.77□□□□□ -0.21
SNX17-201ENST00000233575 TSKUQ8WUA8 353 aa13.77□□□□□ -0.21
SNX17-201ENST00000233575 FABP5P3A8MUU1 101 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 CD7P09564 240 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 CRISP2P16562 243 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 C12orf54Q6X4T0 127 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 M0R2Z0 102 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 GPX1P07203 203 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 CT83Q5H943 113 aa13.76□□□□□ -0.21
SNX17-201ENST00000233575 RBMY1BA6NDE4 496 aaKnown RBP13.75□□□□□ -0.21
SNX17-201ENST00000233575 RBMY1EA6NEQ0 496 aaKnown RBP13.75□□□□□ -0.21
SNX17-201ENST00000233575 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 H3BMM0 161 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 RBMY1DP0C7P1 496 aaKnown RBP13.75□□□□□ -0.21
SNX17-201ENST00000233575 HLA-DRB4P13762 266 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 RNASE4P34096 147 aaKnown RBP13.75□□□□□ -0.21
SNX17-201ENST00000233575 AMTNQ6UX39 209 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 NUP35Q8NFH5 326 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 OR2K2Q8NGT1 345 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 TMEM158Q8WZ71 300 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 HLA-DRB4X5D2U9 266 aa13.75□□□□□ -0.21
SNX17-201ENST00000233575 A8MWL6 223 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 KLLNB2CW77 178 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 ORM1P02763 201 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 SPINK13Q1W4C9 94 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 WFDC10AQ9H1F0 79 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 TRAV12-2A0A075B6T6 113 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 IGKV3D-20A0A0C4DH25 116 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 TMEM189A5PLL7 270 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 DUSP14O95147 198 aaKnown RBP13.74□□□□□ -0.21
SNX17-201ENST00000233575 RPS10P46783 165 aaKnown RBP13.74□□□□□ -0.21
SNX17-201ENST00000233575 FXYD7P58549 80 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 BEAN1Q3B7T3 259 aa13.74□□□□□ -0.21
SNX17-201ENST00000233575 CMYA5Q8N3K9 4069 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 TRBV7-9A0A0J9YWB2 115 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 OR11H12B2RN74 326 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 C9orf66Q5T8R8 295 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 SHISA2Q6UWI4 295 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 ODF3Q96PU9 254 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 NAT8BQ9UHF3 227 aa13.73□□□□□ -0.21
SNX17-201ENST00000233575 IGLL1P15814 213 aa13.72□□□□□ -0.21
SNX17-201ENST00000233575 MRPL54Q6P161 138 aaKnown RBP13.72□□□□□ -0.21
SNX17-201ENST00000233575 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
SNX17-201ENST00000233575 BTF3L4Q96K17 158 aa13.72□□□□□ -0.21
SNX17-201ENST00000233575 PGLYRP4Q96LB8 373 aa13.72□□□□□ -0.21
SNX17-201ENST00000233575 C19orf73Q9NVV2 129 aa13.72□□□□□ -0.21
SNX17-201ENST00000233575 GRIFINA4D1Z8 144 aa13.71□□□□□ -0.21
SNX17-201ENST00000233575 A8MTW9 85 aa13.71□□□□□ -0.21
SNX17-201ENST00000233575 LINC01559Q495D7 138 aa13.71□□□□□ -0.21
SNX17-201ENST00000233575 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
SNX17-201ENST00000233575 NAGKQ9UJ70 344 aa13.71□□□□□ -0.21
SNX17-201ENST00000233575 TRAV12-3A0A0B4J271 114 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 CDKN1BP46527 198 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 INSL3P51460 131 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 MUC21Q5SSG8 566 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 Q6AWC8 147 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 C12orf57Q99622 126 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 GFRA4Q9GZZ7 299 aa13.71□□□□□ -0.22
SNX17-201ENST00000233575 TRAV21A0A0B4J279 112 aa13.7□□□□□ -0.22
SNX17-201ENST00000233575 TYMSP04818 313 aa13.7□□□□□ -0.22
SNX17-201ENST00000233575 LEPP41159 167 aa13.7□□□□□ -0.22
SNX17-201ENST00000233575 TPPP3Q9BW30 176 aa13.7□□□□□ -0.22
SNX17-201ENST00000233575 TRAV9-1A0A075B6T8 112 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms