RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 K7ENP7 123 aa15.63■□□□□ 0.09
SYNGAP1-227ENST00000638142 AP1S3Q96PC3 154 aa15.63■□□□□ 0.09
SYNGAP1-227ENST00000638142 SPTBN4Q9H254 2564 aa15.63■□□□□ 0.09
SYNGAP1-227ENST00000638142 ANKHD1Q8IWZ3 2542 aaKnown RBP15.63■□□□□ 0.09
SYNGAP1-227ENST00000638142 SMKR1H3BMG3 65 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 MINOS1Q5TGZ0 78 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 DYNAPQ8N1N2 210 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 MINOS1-NBL1R4GNA1 71 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 ARHGAP32A7KAX9 2087 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 A1L4Q6 167 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 UQCRFS1P47985 274 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 ZNF575Q86XF7 245 aa15.62■□□□□ 0.09
SYNGAP1-227ENST00000638142 FABP5P3A8MUU1 101 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 FXYD7P58549 80 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 OR4X2Q8NGF9 303 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 CSTL1Q9H114 145 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 MAP1LC3AQ9H492 121 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 IGHV7-81A0A0B4J1V7 117 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 LINC01546A6NGU7 62 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 ORM1P02763 201 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 TMEM11P17152 192 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 HLA-DMBP28068 263 aa15.61■□□□□ 0.09
SYNGAP1-227ENST00000638142 NDUFS7O75251 213 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 RAB9AP51151 201 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 IGFL4Q6B9Z1 124 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 ADAMTSL5Q6ZMM2 481 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 RNF185Q96GF1 192 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 PSMG3-AS1Q96PY0 264 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 JMJD8Q96S16 334 aa15.6■□□□□ 0.09
SYNGAP1-227ENST00000638142 K7EP34 96 aa15.59■□□□□ 0.09
SYNGAP1-227ENST00000638142 KIR3DS1Q14943 382 aa15.59■□□□□ 0.09
SYNGAP1-227ENST00000638142 NBL1P41271 181 aa15.59■□□□□ 0.09
SYNGAP1-227ENST00000638142 LINC01559Q495D7 138 aa15.59■□□□□ 0.09
SYNGAP1-227ENST00000638142 C11orf71Q6IPW1 123 aa15.59■□□□□ 0.09
SYNGAP1-227ENST00000638142 TACC2O95359 2948 aa15.58■□□□□ 0.09
SYNGAP1-227ENST00000638142 RBAKDNA6NC62 111 aa15.58■□□□□ 0.09
SYNGAP1-227ENST00000638142 PSMG4Q5JS54 123 aa15.58■□□□□ 0.09
SYNGAP1-227ENST00000638142 PRSS57Q6UWY2 283 aa15.58■□□□□ 0.09
SYNGAP1-227ENST00000638142 H3BUT2 72 aa15.58■□□□□ 0.08
SYNGAP1-227ENST00000638142 MEGF9Q9H1U4 602 aa15.58■□□□□ 0.08
SYNGAP1-227ENST00000638142 MSRB1Q9NZV6 116 aa15.58■□□□□ 0.08
SYNGAP1-227ENST00000638142 A0A0G2JLM5 398 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 CCL21O00585 134 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 Q8N9W7 124 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 FAM110DQ8TAY7 271 aaPredicted RBP15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 ZNF502Q8TBZ5 544 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 PIFOQ8TCI5 191 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 NXT2Q9NPJ8 142 aaKnown RBP15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 ABCA4P78363 2273 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 MSRB2Q9Y3D2 182 aa15.57■□□□□ 0.08
SYNGAP1-227ENST00000638142 KLK9Q2XQG4 91 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 ZFAND3Q9H8U3 227 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 KLK9Q9UKQ9 250 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 BUB3O43684 328 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 SAP30O75446 220 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 FCER1GP30273 86 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 ERCC8Q13216 396 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 C15orf32Q32M92 178 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 OR2K2Q8NGT1 345 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 SLC50A1Q9BRV3 221 aa15.56■□□□□ 0.08
SYNGAP1-227ENST00000638142 TLN1Q9Y490 2541 aaKnown RBP15.55■□□□□ 0.08
SYNGAP1-227ENST00000638142 IGHV3OR16-8A0A075B7F1 116 aa15.55■□□□□ 0.08
SYNGAP1-227ENST00000638142 IGHV3-35A0A0C4DH35 117 aa15.55■□□□□ 0.08
SYNGAP1-227ENST00000638142 DKK2Q9UBU2 259 aa15.55■□□□□ 0.08
SYNGAP1-227ENST00000638142 TNFRSF6BO95407 300 aa15.55■□□□□ 0.08
SYNGAP1-227ENST00000638142 PRAC2D3DTV9 90 aa15.54■□□□□ 0.08
SYNGAP1-227ENST00000638142 NMUP48645 174 aa15.54■□□□□ 0.08
SYNGAP1-227ENST00000638142 LEPP41159 167 aa15.54■□□□□ 0.08
SYNGAP1-227ENST00000638142 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.54■□□□□ 0.08
SYNGAP1-227ENST00000638142 PCP2Q8IVA1 136 aa15.54■□□□□ 0.08
SYNGAP1-227ENST00000638142 GOSR1O95249 250 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 TCTAP57738 103 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 FOXC1Q12948 553 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 OR5A1Q8NGJ0 315 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 C18orf15Q96N68 181 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 ZMAT4Q9H898 229 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 G3V4G9 280 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 IL17RELQ6ZVW7 336 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 WFDC3Q8IUB2 231 aa15.53■□□□□ 0.08
SYNGAP1-227ENST00000638142 A0A1W2PPM0 123 aa15.52■□□□□ 0.08
SYNGAP1-227ENST00000638142 CLEC3BP05452 202 aa15.52■□□□□ 0.08
SYNGAP1-227ENST00000638142 ODF1Q14990 250 aa15.52■□□□□ 0.08
SYNGAP1-227ENST00000638142 CDSNQ15517 529 aa15.52■□□□□ 0.08
SYNGAP1-227ENST00000638142 NEGR1Q7Z3B1 354 aa15.52■□□□□ 0.08
SYNGAP1-227ENST00000638142 SIRPDQ9H106 197 aa15.52■□□□□ 0.08
SYNGAP1-227ENST00000638142 GAS8-AS1O95177 125 aa15.52■□□□□ 0.07
SYNGAP1-227ENST00000638142 ZFP36P26651 326 aaKnown RBP15.52■□□□□ 0.07
SYNGAP1-227ENST00000638142 RNF182Q8N6D2 247 aa15.52■□□□□ 0.07
SYNGAP1-227ENST00000638142 SPTBN2O15020 2390 aa15.51■□□□□ 0.07
SYNGAP1-227ENST00000638142 ECSCRQ19T08 205 aa15.51■□□□□ 0.07
SYNGAP1-227ENST00000638142 ADORA2A-AS1P86434 159 aa15.51■□□□□ 0.07
SYNGAP1-227ENST00000638142 DTX2Q86UW9 622 aa15.51■□□□□ 0.07
SYNGAP1-227ENST00000638142 NAA38Q9BRA0 125 aaKnown RBP15.51■□□□□ 0.07
SYNGAP1-227ENST00000638142 EVI2AP22794 236 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 Q8N8P6 123 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 IGKV3D-20A0A0C4DH25 116 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 CLPSL1A2RUU4 121 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 ATP6V0E1O15342 81 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 RAB37Q96AX2 223 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 MRPL53Q96EL3 112 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms