RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 RPL7P18124 248 aaKnown RBP0.69□□□□□ -2.3
CDR1-202ENST00000625883 POLR2HP52434 150 aaKnown RBP0.69□□□□□ -2.3
CDR1-202ENST00000625883 TEX29Q8N6K0 151 aa0.69□□□□□ -2.3
CDR1-202ENST00000625883 CLEC2BQ92478 149 aa0.69□□□□□ -2.3
CDR1-202ENST00000625883 C5orf58C9J3I9 102 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 K7EIL1 84 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 IFNA21P01568 189 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 PDE6GP18545 87 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 NDUFA6P56556 154 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 MAXP61244 160 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 TFAMQ00059 246 aaKnown RBP0.68□□□□□ -2.3
CDR1-202ENST00000625883 NEDD8Q15843 81 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 FKBP11Q9NYL4 201 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 TRAPPC2LQ9UL33 140 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 ANKRD31Q8N7Z5 1873 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 FANCMQ8IYD8 2048 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 TCOF1Q13428 1488 aaKnown RBP0.68□□□□□ -2.3
CDR1-202ENST00000625883 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
CDR1-202ENST00000625883 NUP210Q8TEM1 1887 aaPredicted RBP0.68□□□□□ -2.3
CDR1-202ENST00000625883 C3orf85A0A1B0GTC6 90 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 TPT1P13693 172 aaKnown RBP0.67□□□□□ -2.3
CDR1-202ENST00000625883 CASC2Q6XLA1 102 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 OR5AK2Q8NH90 309 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 GRPEL2Q8TAA5 225 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 NABP2Q9BQ15 211 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 TRAV13-1A0A0B4J241 112 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 TRBV7-6A0A0J9YX20 115 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 ZNF727A8MUV8 499 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 H3BMG7 143 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 FAM107AO95990 144 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 FOXA3P55318 350 aaPredicted RBP0.67□□□□□ -2.3
CDR1-202ENST00000625883 TMEM128Q5BJH2 165 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 MORN4Q8NDC4 146 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 LXNQ9BS40 222 aa0.67□□□□□ -2.3
CDR1-202ENST00000625883 BOKQ9UMX3 212 aaPredicted RBP0.67□□□□□ -2.3
CDR1-202ENST00000625883 DLC1Q96QB1 1528 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 PTPRDP23468 1912 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 FAM135BQ49AJ0 1406 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 SAA1P0DJI8 122 aaPredicted RBP0.66□□□□□ -2.3
CDR1-202ENST00000625883 TOMM20LQ6UXN7 152 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 SELENOSQ9BQE4 189 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 DDA1Q9BW61 102 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 CBLN4Q9NTU7 201 aa0.66□□□□□ -2.3
CDR1-202ENST00000625883 LOC107984640A0A0U1RRK4 108 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 NUPR2A6NF83 97 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 IGHV3-30P01768 117 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 IGHV3-30-5P0DP03 117 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 RPS3P23396 243 aaKnown RBP eCLIP0.65□□□□□ -2.31
CDR1-202ENST00000625883 RPL37AP61513 92 aaKnown RBP0.65□□□□□ -2.31
CDR1-202ENST00000625883 Q6ZQY7 126 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 C5orf17Q8NAS9 161 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 OR9Q1Q8NGQ5 310 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 CCDC115Q96NT0 180 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 CIB3Q96Q77 187 aaPredicted RBP0.65□□□□□ -2.31
CDR1-202ENST00000625883 LPAR5Q9H1C0 372 aa0.65□□□□□ -2.31
CDR1-202ENST00000625883 A0A0D9SG42 100 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 A6NN06 94 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 CRYGSP22914 178 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 SPINK9Q5DT21 86 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 SAMD13Q5VXD3 122 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 IZUMO2Q6UXV1 221 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 SMIM15Q7Z3B0 74 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.64□□□□□ -2.31
CDR1-202ENST00000625883 CCL19Q99731 98 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 ZGRF1Q86YA3 2104 aa0.64□□□□□ -2.31
CDR1-202ENST00000625883 LOC107984156A0A0G2JMH3 177 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 PRORSD1PA6NEY8 169 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 SLC25A4P12235 298 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 Q86TA4 180 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 ARL17AQ8IVW1 177 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 ATOH7Q8N100 152 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 TMEM229BQ8NBD8 167 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 NDUFAF1Q9Y375 327 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 USP54Q70EL1 1684 aa0.63□□□□□ -2.31
CDR1-202ENST00000625883 MUC4Q99102 2169 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.62□□□□□ -2.31
CDR1-202ENST00000625883 LOC107986453A0A1B0GWG9 222 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 M0QZK8 103 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 SRP9P49458 86 aaKnown RBP0.62□□□□□ -2.31
CDR1-202ENST00000625883 CSAG1Q6PB30 78 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 C10orf111Q8N326 155 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 OR51A4Q8NGJ6 313 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 NAT14Q8WUY8 206 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 MPC1Q9Y5U8 109 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 FGD6Q6ZV73 1430 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 TENM3Q9P273 2699 aa0.62□□□□□ -2.31
CDR1-202ENST00000625883 ZFC3H1O60293 1989 aaKnown RBP0.61□□□□□ -2.31
CDR1-202ENST00000625883 S100GP29377 79 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 B2MP61769 119 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 BLCAPP62952 87 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 SPATA8Q6RVD6 105 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 TCTEX1D1Q8N7M0 179 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 A2MP01023 1474 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 CTTNBP2Q8WZ74 1663 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 ASH1LQ9NR48 2969 aaKnown RBP0.61□□□□□ -2.31
CDR1-202ENST00000625883 CCL4P13236 92 aa0.61□□□□□ -2.31
CDR1-202ENST00000625883 RPL22P35268 128 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms