RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 AP3S2P59780 193 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 IBA57Q5T440 356 aaKnown RBP9.88□□□□□ -0.83
PNKP-218ENST00000625299 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
PNKP-218ENST00000625299 MGST2Q99735 147 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 SLC25A21Q9BQT8 299 aaPredicted RBP9.88□□□□□ -0.83
PNKP-218ENST00000625299 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
PNKP-218ENST00000625299 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
PNKP-218ENST00000625299 K7EP13 123 aa9.87□□□□□ -0.83
PNKP-218ENST00000625299 GPX1P07203 203 aa9.87□□□□□ -0.83
PNKP-218ENST00000625299 GUK1Q16774 197 aa9.87□□□□□ -0.83
PNKP-218ENST00000625299 C10orf126Q8N4M7 172 aa9.87□□□□□ -0.83
PNKP-218ENST00000625299 RAB2BQ8WUD1 216 aa9.87□□□□□ -0.83
PNKP-218ENST00000625299 SFTA3P0C7M3 94 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 GYPEP15421 78 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 TNFSF8P32971 234 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 ARL16Q0P5N6 197 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 Q6ZQT7 251 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 Q6ZRG5 221 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 Q8N814 137 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 SYT8Q8NBV8 401 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 DYNC2LI1Q8TCX1 351 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 TRIM63Q969Q1 353 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 SOSTQ9BQB4 213 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 MRPL32Q9BYC8 188 aaKnown RBP9.86□□□□□ -0.83
PNKP-218ENST00000625299 AGPAT4-IT1Q9H0P7 198 aa9.86□□□□□ -0.83
PNKP-218ENST00000625299 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 CAMLGP49069 296 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 PRR9Q5T870 116 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 MIC13Q5XKP0 118 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 MRPL53Q96EL3 112 aaKnown RBP9.85□□□□□ -0.83
PNKP-218ENST00000625299 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 Q9HAA7 133 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 DNAJC4Q9NNZ3 241 aa9.85□□□□□ -0.83
PNKP-218ENST00000625299 RCL1Q9Y2P8 373 aaKnown RBP9.85□□□□□ -0.83
PNKP-218ENST00000625299 C9orf170A2RU37 121 aa9.84□□□□□ -0.83
PNKP-218ENST00000625299 TSC22D2O75157 780 aa9.84□□□□□ -0.83
PNKP-218ENST00000625299 SERTAD4-AS1Q5TG53 156 aa9.84□□□□□ -0.83
PNKP-218ENST00000625299 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
PNKP-218ENST00000625299 ZNF479Q96JC4 524 aa9.84□□□□□ -0.83
PNKP-218ENST00000625299 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
PNKP-218ENST00000625299 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 IGKV2-40A0A087WW87 121 aaPredicted RBP9.83□□□□□ -0.84
PNKP-218ENST00000625299 ZNF253O75346 499 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 IGKV2D-40P01614 121 aaPredicted RBP9.83□□□□□ -0.84
PNKP-218ENST00000625299 CRISP2P16562 243 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 IAH1Q2TAA2 248 aaPredicted RBP9.83□□□□□ -0.84
PNKP-218ENST00000625299 C4orf46Q504U0 113 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 TMEM78Q5T7P6 136 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 NRARPQ7Z6K4 114 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 EXOC3-AS1Q8N2X6 119 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 OR1L4Q8NGR5 311 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 BLNKQ8WV28 456 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 TXNDC17Q9BRA2 123 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 GGACTQ9BVM4 153 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 GSKIPQ9P0R6 139 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
PNKP-218ENST00000625299 LRP1Q07954 4544 aaKnown RBP9.82□□□□□ -0.84
PNKP-218ENST00000625299 ORM1P02763 201 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 PPT1P50897 306 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 TAS2R30P59541 319 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 UBE2MP61081 183 aaKnown RBP9.82□□□□□ -0.84
PNKP-218ENST00000625299 RAB31Q13636 194 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 MUC21Q5SSG8 566 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 ZFAND2AQ8N6M9 145 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 PFDN5Q99471 154 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 SLIRPQ9GZT3 109 aaKnown RBP9.82□□□□□ -0.84
PNKP-218ENST00000625299 SRRQ9GZT4 340 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 PRELID1Q9Y255 219 aa9.82□□□□□ -0.84
PNKP-218ENST00000625299 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 C9JCJ5 164 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 NDUFB4O95168 129 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 PYYP10082 97 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 HIST1H1EP10412 219 aaKnown RBP9.81□□□□□ -0.84
PNKP-218ENST00000625299 FAM122CQ6P4D5 195 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 MRPS26Q9BYN8 205 aaKnown RBP9.81□□□□□ -0.84
PNKP-218ENST00000625299 AAMDCQ9H7C9 122 aa9.81□□□□□ -0.84
PNKP-218ENST00000625299 LOC100131303A0A0U1RQF7 123 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 C7orf66A4D0T2 115 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 L7N2F9 121 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 BCAP31P51572 246 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 VAMP2P63027 116 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 C9orf47Q6ZRZ4 202 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 C12orf45Q8N5I9 185 aaPredicted RBP9.8□□□□□ -0.84
PNKP-218ENST00000625299 OR10G4Q8NGN3 311 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 Q8TAT8 98 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 SLC25A31Q9H0C2 315 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 PLA2G2DQ9UNK4 145 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 FLVCR2Q9UPI3 526 aa9.8□□□□□ -0.84
PNKP-218ENST00000625299 CST7O76096 145 aa9.79□□□□□ -0.84
PNKP-218ENST00000625299 C1QBP02746 253 aa9.79□□□□□ -0.84
PNKP-218ENST00000625299 NMBP08949 121 aa9.79□□□□□ -0.84
PNKP-218ENST00000625299 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
PNKP-218ENST00000625299 SLC39A9Q9NUM3 307 aa9.79□□□□□ -0.84
PNKP-218ENST00000625299 UBE2L5PA0A1B0GUS4 154 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 NOL3O60936 208 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms