RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 LYPD2Q6UXB3 125 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 UNQ6494/PRO21346Q6UXR6 183 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 ZNRD1Q9P1U0 126 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 GAGE12JA6NER3 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 NDUFS7O75251 213 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 GAGE7O76087 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 IGLV3-1P01715 115 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 GAGE12FP0CL80 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 GAGE12GP0CL81 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 GAGE12IP0CL82 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 GAGE4Q13068 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 C12orf74Q32Q52 190 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 ZNF407Q9C0G0 2248 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 A0A087WX48 190 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 A0A1W2PRX2 142 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 MBD3L4A6NDZ8 208 aaPredicted RBP8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 MBD3L3A6NE82 208 aaPredicted RBP8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 MBD3L5A6NJ08 208 aaPredicted RBP8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 MBD3L2Q8NHZ7 208 aaPredicted RBP8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 C1QTNF4Q9BXJ3 329 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 TRGV1A0A0A0MS02 117 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 SOCS3O14543 225 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 TMEM105Q8N8V8 129 aa8.55□□□□□ -1.04
CLTCL1-209ENST00000617103 FAM223BA6NKX1 122 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 UTF1Q5T230 341 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 FAM223AQ8IWN6 122 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 WT1-ASQ06250 92 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 IGHG3P01860 377 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 MORN5Q5VZ52 161 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 ZC2HC1AQ96GY0 325 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 HLA-DMBP28068 263 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 IL17RELQ6ZVW7 336 aa8.54□□□□□ -1.04
CLTCL1-209ENST00000617103 TRPM7Q96QT4 1865 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 NUPR1O60356 82 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 DTX2Q86UW9 622 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 CMC4P56277 68 aaPredicted RBP8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 WDR86Q86TI4 376 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 DTX1Q86Y01 620 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 RNASE8Q8TDE3 154 aaKnown RBP8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 YLPM1P49750 1951 aaKnown RBP8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.048e-7■■■□□ 16.8
CLTCL1-209ENST00000617103 K7EM74 188 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 TDRG1Q3Y452 100 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 H3BRN7 92 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 C15orf65H3BRN8 121 aa8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 DAZ1Q9NQZ3 744 aaKnown RBP8.53□□□□□ -1.04
CLTCL1-209ENST00000617103 EFNA4P52798 201 aa8.52□□□□□ -1.04
CLTCL1-209ENST00000617103 C17orf58Q2M2W7 97 aa8.52□□□□□ -1.04
CLTCL1-209ENST00000617103 THAP8Q8NA92 274 aa8.52□□□□□ -1.04
CLTCL1-209ENST00000617103 Q8NFD4 153 aa8.52□□□□□ -1.04
CLTCL1-209ENST00000617103 MYLKQ15746 1914 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 LTAP01374 205 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 GATA4P43694 442 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 POU2AF1Q16633 256 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 BOD1L2Q8IYS8 172 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 TEX48A0A1B0GUV7 120 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 GAGE5Q13069 117 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 GAGE6Q13070 117 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 Q6ZR03 302 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 TCF20Q9UGU0 1960 aaKnown RBP8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 TRAV26-2A0A0B4J265 109 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 H3BUX3 64 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 RHODO00212 210 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 PLCE1Q9P212 2302 aa8.52□□□□□ -1.05
CLTCL1-209ENST00000617103 COL6A6A6NMZ7 2263 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 GPR179Q6PRD1 2367 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 I3L3M4 83 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 ASPHD1Q5U4P2 390 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 J3QQQ9 107 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 DKK1O94907 266 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 FAM110DQ8TAY7 271 aaPredicted RBP8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 PLXNA3P51805 1871 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 OVOL3O00110 214 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 CD59P13987 128 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 NTN5Q8WTR8 489 aaPredicted RBP8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 INSP01308 110 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 IGLC1P0CG04 106 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 ZNF134P52741 427 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 LINC00311Q8N616 119 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 C20orf78Q9BR46 151 aa8.51□□□□□ -1.05
CLTCL1-209ENST00000617103 C3orf36Q3SXR2 165 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 C15orf53Q8NAA6 179 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 Q8TCH9 128 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 B5MCH6 92 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 FAM120AOSQ5T036 256 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 VWA8A3KMH1 1905 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 UBL5Q9BZL1 73 aa8.5□□□□□ -1.05
CLTCL1-209ENST00000617103 COL8A2P25067 703 aa8.49□□□□□ -1.05
CLTCL1-209ENST00000617103 SAP30O75446 220 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms