RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RPL11P62913 178 aaKnown RBP6.76□□□□□ -1.33
CCDC47-207ENST00000612558 C18orf65Q6ZTR6 163 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 OR11H1Q8NG94 326 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 OR1N2Q8NGR9 330 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 DPF1Q92782 380 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 BTF3L4Q96K17 158 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 FAM210BQ96KR6 192 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 PYGO2Q9BRQ0 406 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 NRN1Q9NPD7 142 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 IL36BQ9NZH7 164 aa6.76□□□□□ -1.33
CCDC47-207ENST00000612558 FN1P02751 2386 aaKnown RBP6.76□□□□□ -1.33
CCDC47-207ENST00000612558 IGKV2-40A0A087WW87 121 aaPredicted RBP6.75□□□□□ -1.33
CCDC47-207ENST00000612558 ZNF705GA8MUZ8 300 aaPredicted RBP6.75□□□□□ -1.33
CCDC47-207ENST00000612558 IGKV2D-40P01614 121 aaPredicted RBP6.75□□□□□ -1.33
CCDC47-207ENST00000612558 DEFB136Q30KP8 78 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 SAMD13Q5VXD3 122 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 KLHL30-AS1Q8NEE0 82 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 NUDT10Q8NFP7 164 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 NUDT11Q96G61 164 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 MLXQ9UH92 298 aa6.75□□□□□ -1.33
CCDC47-207ENST00000612558 TRAV9-1A0A075B6T8 112 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 A0A1W2PPQ1 181 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 C2orf70A6NJV1 201 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 SOCS3O14543 225 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 GATCO43716 136 aaKnown RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 CRLF1O75462 422 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 CD28P10747 220 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 EDN2P20800 178 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 CBLN1P23435 193 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 RPS10P46783 165 aaKnown RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 SLURP1P55000 103 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 SAPCD1Q5SSQ6 148 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 PRR27Q6MZM9 219 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 TCF24Q7RTU0 167 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 DAZAP1Q96EP5 407 aaKnown RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 PEMTQ9UBM1 199 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 TSSC4Q9Y5U2 329 aaPredicted RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 F8P00451 2351 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 BAHCC1Q9P281 2608 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 C19orf71A6NCJ1 209 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 PRAC2D3DTV9 90 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 M0QZ24 198 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 PRB4P10163 310 aaPredicted RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 LINC00322Q6ZN03 302 aaPredicted RBP6.74□□□□□ -1.33
CCDC47-207ENST00000612558 COX8CQ7Z4L0 72 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 GBGT1Q8N5D6 347 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 VGLL1Q99990 258 aa6.74□□□□□ -1.33
CCDC47-207ENST00000612558 SMIM27A0A1W2PRY6 76 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 P01737 135 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 TYMSP04818 313 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 CT45A10P0DMU9 189 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 ID1P41134 155 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 PROK1P58294 105 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 RAB5BP61020 215 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 CT83Q5H943 113 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 OR9G4Q8NGQ1 327 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 DUX3Q96PT4 197 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 PRR25Q96S07 402 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 CITED2Q99967 270 aaPredicted RBP6.73□□□□□ -1.33
CCDC47-207ENST00000612558 NDFIP1Q9BT67 221 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 SRD5A3Q9H8P0 318 aa6.73□□□□□ -1.33
CCDC47-207ENST00000612558 C2CD3Q4AC94 2353 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
CCDC47-207ENST00000612558 IGKV3-7A0A075B6H7 116 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 NPIPB6E9PJ23 425 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 OVOL1O14753 267 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 RPL19P84098 196 aaKnown RBP6.72□□□□□ -1.33
CCDC47-207ENST00000612558 ERCC8Q13216 396 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 FHL3Q13643 280 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 TMEM78Q5T7P6 136 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 C9orf47Q6ZRZ4 202 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 ZNF738Q8NE65 137 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 OR4B1Q8NGF8 309 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 DCANP1Q8TF63 244 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 TSKUQ8WUA8 353 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 DLX4Q92988 240 aaPredicted RBP6.72□□□□□ -1.33
CCDC47-207ENST00000612558 RAX2Q96IS3 184 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 C8orf49Q96NF6 230 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 MS4A6AQ9H2W1 248 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
CCDC47-207ENST00000612558 PPP1R14DQ9NXH3 145 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 WNK1Q9H4A3 2382 aa6.72□□□□□ -1.33
CCDC47-207ENST00000612558 A0A1W2PRX2 142 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 A8MWL6 223 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 CCL24O00175 119 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 CA1P00915 261 aaPredicted RBP6.71□□□□□ -1.34
CCDC47-207ENST00000612558 CRIP1P50238 77 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 ZNF138P52744 262 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 HIST2H2BDQ6DRA6 164 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 Q8TAT8 98 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 LINC00477Q96M19 166 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms