RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 SPATA3Q8NHX4 192 aa16.39■□□□□ 0.21
USF2-216ENST00000607959 RNASE7Q9H1E1 156 aaKnown RBP16.39■□□□□ 0.21
USF2-216ENST00000607959 IZUMO1RA6ND01 250 aa16.38■□□□□ 0.21
USF2-216ENST00000607959 F6UB75 175 aa16.38■□□□□ 0.21
USF2-216ENST00000607959 LINC00482Q8N8I6 264 aa16.38■□□□□ 0.21
USF2-216ENST00000607959 SMIM12Q96EX1 92 aa16.38■□□□□ 0.21
USF2-216ENST00000607959 C8orf49Q96NF6 230 aa16.38■□□□□ 0.21
USF2-216ENST00000607959 YPEL4Q96NS1 127 aa16.38■□□□□ 0.21
USF2-216ENST00000607959 MT-ND4LP03901 98 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 DYNLRB2Q8TF09 96 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 ZC2HC1AQ96GY0 325 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 SMCO4Q9NRQ5 59 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 TMEM242Q9NWH2 141 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 ZNF688P0C7X2 276 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 C9orf47Q6ZRZ4 202 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 PRR25Q96S07 402 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 TUBA4BQ9H853 241 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 ZFP30Q9Y2G7 519 aa16.37■□□□□ 0.21
USF2-216ENST00000607959 ID1P41134 155 aa16.36■□□□□ 0.21
USF2-216ENST00000607959 CTDSP1Q9GZU7 261 aa16.36■□□□□ 0.21
USF2-216ENST00000607959 CRIP1P50238 77 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 SAMD13Q5VXD3 122 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 ANAPC16Q96DE5 110 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 TRRAPQ9Y4A5 3859 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 STAB1Q9NY15 2570 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 PRR27Q6MZM9 219 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 RBPMS2Q6ZRY4 209 aaKnown RBP16.35■□□□□ 0.21
USF2-216ENST00000607959 COX8CQ7Z4L0 72 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 OR10G8Q8NGN5 311 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 V9GYV3 84 aa16.35■□□□□ 0.21
USF2-216ENST00000607959 ERVFC1-1P60608 527 aa16.34■□□□□ 0.21
USF2-216ENST00000607959 PSMG4Q5JS54 123 aa16.34■□□□□ 0.21
USF2-216ENST00000607959 GDF5OSQ5U4N7 250 aa16.34■□□□□ 0.21
USF2-216ENST00000607959 OSTCQ9NRP0 149 aa16.34■□□□□ 0.21
USF2-216ENST00000607959 C19orf71A6NCJ1 209 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 FBLL1A6NHQ2 334 aaKnown RBP16.33■□□□□ 0.21
USF2-216ENST00000607959 COLCA2A8K830 154 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 NPIPB6E9PJ23 425 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 H7BYZ3 331 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 PF4P02776 101 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 NUDT10Q8NFP7 164 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 OR8A1Q8NGG7 326 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 NUDT11Q96G61 164 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 ZNF492Q9P255 531 aa16.33■□□□□ 0.21
USF2-216ENST00000607959 TRAV2A0A0B4J234 112 aa16.33■□□□□ 0.2
USF2-216ENST00000607959 FAM231DQ6ZW35 169 aa16.33■□□□□ 0.2
USF2-216ENST00000607959 ZNF256Q9Y2P7 627 aaPredicted RBP16.33■□□□□ 0.2
USF2-216ENST00000607959 AGRNO00468 2067 aa16.32■□□□□ 0.2
USF2-216ENST00000607959 SAP30O75446 220 aa16.32■□□□□ 0.2
USF2-216ENST00000607959 ZNF80P51504 273 aaPredicted RBP16.32■□□□□ 0.2
USF2-216ENST00000607959 PAFAH1B2P68402 229 aa16.32■□□□□ 0.2
USF2-216ENST00000607959 IBA57Q5T440 356 aaKnown RBP16.32■□□□□ 0.2
USF2-216ENST00000607959 PPP1R14DQ9NXH3 145 aa16.32■□□□□ 0.2
USF2-216ENST00000607959 URGCP-MRPS24S4R325 110 aa16.32■□□□□ 0.2
USF2-216ENST00000607959 CXorf65A6NEN9 183 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 IGLV1-51P01701 117 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 PFN1P07737 140 aaKnown RBP16.31■□□□□ 0.2
USF2-216ENST00000607959 CT45A10P0DMU9 189 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 ZNF138P52744 262 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 TRAV25A0A0B4J276 109 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 SNRPD3P62318 126 aaKnown RBP16.31■□□□□ 0.2
USF2-216ENST00000607959 ELOBQ15370 118 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 TMEM78Q5T7P6 136 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 C15orf54Q8N8G6 183 aa16.31■□□□□ 0.2
USF2-216ENST00000607959 COL6A5A8TX70 2615 aa16.3■□□□□ 0.2
USF2-216ENST00000607959 PPP1R2P9O14990 202 aa16.3■□□□□ 0.2
USF2-216ENST00000607959 HIST1H1AQ02539 215 aaPredicted RBP16.3■□□□□ 0.2
USF2-216ENST00000607959 SAPCD1Q5SSQ6 148 aa16.3■□□□□ 0.2
USF2-216ENST00000607959 NOTCH3Q9UM47 2321 aa16.29■□□□□ 0.2
USF2-216ENST00000607959 OR10J6PQ8NGY7 276 aa16.29■□□□□ 0.2
USF2-216ENST00000607959 FAM19A4Q96LR4 140 aa16.29■□□□□ 0.2
USF2-216ENST00000607959 SPAG8Q99932 426 aaPredicted RBP16.29■□□□□ 0.2
USF2-216ENST00000607959 CA1P00915 261 aaPredicted RBP16.29■□□□□ 0.2
USF2-216ENST00000607959 CD33P20138 364 aa16.29■□□□□ 0.2
USF2-216ENST00000607959 LINC00477Q96M19 166 aa16.29■□□□□ 0.2
USF2-216ENST00000607959 A0A0J9YX75 114 aa16.28■□□□□ 0.2
USF2-216ENST00000607959 PRR9Q5T870 116 aa16.28■□□□□ 0.2
USF2-216ENST00000607959 ZNF747Q9BV97 191 aa16.28■□□□□ 0.2
USF2-216ENST00000607959 CXCL1P09341 107 aa16.27■□□□□ 0.2
USF2-216ENST00000607959 ZNF124Q15973 351 aa16.27■□□□□ 0.2
USF2-216ENST00000607959 TGIF2-C20orf24A0A0A6YYL0 155 aa16.27■□□□□ 0.19
USF2-216ENST00000607959 DEFB131AP59861 70 aa16.27■□□□□ 0.19
USF2-216ENST00000607959 MAP6D1Q9H9H5 199 aa16.27■□□□□ 0.19
USF2-216ENST00000607959 ZNF705GA8MUZ8 300 aaPredicted RBP16.26■□□□□ 0.19
USF2-216ENST00000607959 GATCO43716 136 aaKnown RBP16.26■□□□□ 0.19
USF2-216ENST00000607959 FAM3BP58499 235 aaPredicted RBP16.26■□□□□ 0.19
USF2-216ENST00000607959 Q6ZQT7 251 aa16.26■□□□□ 0.19
USF2-216ENST00000607959 ZFAND2AQ8N6M9 145 aa16.26■□□□□ 0.19
USF2-216ENST00000607959 SAV1Q9H4B6 383 aaPredicted RBP16.26■□□□□ 0.19
USF2-216ENST00000607959 BIN3Q9NQY0 253 aa16.26■□□□□ 0.19
USF2-216ENST00000607959 IL36BQ9NZH7 164 aa16.26■□□□□ 0.19
USF2-216ENST00000607959 SH2D1AO60880 128 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 KIR3DS1Q14943 382 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 ODF3L2Q3SX64 289 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 OR4C46A6NHA9 309 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 SMUG1Q53HV7 270 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 ZNF575Q86XF7 245 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 NDFIP1Q9BT67 221 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 LENEPQ9Y5L5 61 aa16.25■□□□□ 0.19
USF2-216ENST00000607959 FOXI2Q6ZQN5 318 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms