RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZNF503Q96F45 646 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 WDR61Q9GZS3 305 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-208ENST00000595726 BOLA2-SMG1P6H3BVE0 249 aa9.49□□□□□ -0.89
SHKBP1-208ENST00000595726 Q6ZRN7 208 aaPredicted RBP9.49□□□□□ -0.89
SHKBP1-208ENST00000595726 BAP18Q8IXM2 172 aa9.49□□□□□ -0.89
SHKBP1-208ENST00000595726 ATP5SQ99766 215 aa9.49□□□□□ -0.89
SHKBP1-208ENST00000595726 MBD2Q9UBB5 411 aa9.49□□□□□ -0.89
SHKBP1-208ENST00000595726 HSPB11Q9Y547 144 aa9.49□□□□□ -0.89
SHKBP1-208ENST00000595726 ZNF253O75346 499 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 INSP01308 110 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 LINC00315P59091 139 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 ICAM4Q14773 271 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 GUK1Q16774 197 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 TMEM208Q9BTX3 173 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
SHKBP1-208ENST00000595726 TRAV12-2A0A075B6T6 113 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 LYRM9A8MSI8 78 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 PRAC2D3DTV9 90 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 ATP5G1P05496 136 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 PYYP10082 97 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 AZU1P20160 251 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 RPL12P30050 165 aaKnown RBP9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 ATP5G3P48201 142 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 RHOBP62745 196 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 ESRGQ1W209 222 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 Q6ZSN1 163 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
SHKBP1-208ENST00000595726 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 C17orf112F2Z3M2 114 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 MIR17HGQ75NE6 70 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 SMIM3Q9BZL3 60 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 TNFRSF18Q9Y5U5 241 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 RNF213Q63HN8 5207 aa9.46□□□□□ -0.9
SHKBP1-208ENST00000595726 PLAC8L1A1L4L8 177 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 CBY3A6NI87 242 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 NDUFB4O95168 129 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 IFNA5P01569 189 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 DNAH10OSP0CZ25 163 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 CDKN1BP46527 198 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 PDE6HQ13956 83 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 MRPL32Q9BYC8 188 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
SHKBP1-208ENST00000595726 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 A0A1W2PPQ1 181 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 M0R3E3 92 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 OR10J6PQ8NGY7 276 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 MRPL53Q96EL3 112 aaKnown RBP9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 MED28Q9H204 178 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
SHKBP1-208ENST00000595726 TRAV26-1A0A087WT03 109 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 A0A0J9YY99 117 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 NPIPB6E9PJ23 425 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 EREGO14944 169 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 OR5I1Q13606 314 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 KIR3DS1Q14943 382 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 BLNKQ8WV28 456 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 UPK3BQ9BT76 320 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
SHKBP1-208ENST00000595726 TSPOP30536 169 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 ERVFC1-1P60608 527 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 EXOC3-AS1Q8N2X6 119 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 SCGB1C1Q8TD33 95 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 GNPNAT1Q96EK6 184 aaPredicted RBP9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 ODF3Q96PU9 254 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 OR51M1Q9H341 326 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
SHKBP1-208ENST00000595726 OR10J4P0C629 311 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 NBEAP1P0C6P0 100 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 CT45A10P0DMU9 189 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 TAS2R60P59551 318 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 RGS21Q2M5E4 152 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 LINC01587Q99440 93 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 C20orf144Q9BQM9 153 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 AAMDCQ9H7C9 122 aa9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-208ENST00000595726 OR7C2O60412 319 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 GIPP09681 153 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 GCSHP23434 173 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 Q5BKY6 102 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 RXFP4Q8TDU9 374 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 ASB13Q8WXK3 278 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 PHYHIPLQ96FC7 376 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 AQP10Q96PS8 301 aa9.4□□□□□ -0.9
SHKBP1-208ENST00000595726 A0A087WTM6 91 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms