RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 S4R3C0 116 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 ARL2-SNX15V9GYD0 113 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 IGLV5-52A0A0A0MRZ9 124 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 BORCS7-ASMTA0A0B4J1R7 106 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 IGHV3-21A0A0B4J1V1 117 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 TMEM213A2RRL7 107 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 GGTLC3B5MD39 225 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 SOCS3O14543 225 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 ACTL6BO94805 426 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 NDUFB4O95168 129 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 C8orf88P0DMB2 117 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 HTN3P15516 51 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 C4BPBP20851 252 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 CBLN1P23435 193 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 NPPCP23582 126 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 CRYBB3P26998 211 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 GPR183P32249 361 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 SNCAP37840 140 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 SUB1P53999 127 aaKnown RBP eCLIP3.37□□□□□ -1.87
ERCC1-216ENST00000592444 EIF5AP63241 154 aaKnown RBP3.37□□□□□ -1.87
ERCC1-216ENST00000592444 RPP30P78346 268 aaKnown RBP3.37□□□□□ -1.87
ERCC1-216ENST00000592444 AKR1C1Q04828 323 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 FFAR4Q5NUL3 377 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 MIR17HGQ75NE6 70 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 APRG1Q8IVJ8 170 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 BPIFCQ8NFQ6 507 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 GLMPQ8WWB7 406 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 RAB24Q969Q5 203 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 C11orf52Q96A22 123 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 FXYD5Q96DB9 178 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 ACY3Q96HD9 319 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 USMG5Q96IX5 58 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 FAM210AQ96ND0 272 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 UHRF2Q96PU4 802 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 SHANK2-AS3Q9BTD1 123 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 SLC25A22Q9H936 323 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF586Q9NXT0 402 aa3.37□□□□□ -1.87
ERCC1-216ENST00000592444 TRBV20OR9-2A0A075B6H5 130 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 A0A087X0K7 114 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 TRBV7-1A0A0A6YYK4 115 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 LOC102723971A0A1B0GUV8 181 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 GAGE12BA1L429 117 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 RAB19A4D1S5 217 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 MAP1LC3B2A6NCE7 125 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 GAGE12HA6NDE8 117 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 OR2T8A6NH00 312 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 PPP5D1E7EU14 171 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 SLC17A3O00476 420 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 BUB3O43684 328 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 ARL14EPLP0DKL9 152 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 NUP62P37198 522 aaPredicted RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 CDC34P49427 236 aaPredicted RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 MFAP4P55083 255 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF506Q5JVG8 444 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 FAM90A2PQ658T7 463 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 ETFRF1Q6IPR1 90 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 SLC25A24Q6NUK1 477 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 TOMM20LQ6UXN7 152 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF600Q6ZNG1 722 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 RBPMS2Q6ZRY4 209 aaKnown RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 LRRC20Q8TCA0 184 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 MRPL32Q9BYC8 188 aaKnown RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 SLC25A39Q9BZJ4 359 aaPredicted RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 MAP1LC3BQ9GZQ8 125 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 ENY2Q9NPA8 101 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 KCNIP2Q9NS61 270 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 TMEM14CQ9P0S9 112 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 DKK2Q9UBU2 259 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 FUT9Q9Y231 359 aa3.36□□□□□ -1.87
ERCC1-216ENST00000592444 YTHDF2Q9Y5A9 579 aaKnown RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
ERCC1-216ENST00000592444 TRAV30A0A087WSZ9 112 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 TRAV5A0A0B4J249 113 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 A8MTW9 85 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 H3BQ15 152 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 TEX46H3BTG2 121 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 NDUFA4O00483 81 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF253O75346 499 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 ATP6V1G1O75348 118 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 IGHV3-23P01764 117 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 APOHP02749 345 aaPredicted RBP3.35□□□□□ -1.87
ERCC1-216ENST00000592444 BCL2P10415 239 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 GCHFRP30047 84 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 NPBWR1P48145 328 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 CCL18P55774 89 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 FAM209BQ5JX69 171 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 SIGLEC15Q6ZMC9 328 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 SLC7A5P1Q8MH63 180 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 OR51G1Q8NGK1 321 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 OR10G9Q8NGN4 311 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 FAM213BQ8TBF2 198 aa3.35□□□□□ -1.87
ERCC1-216ENST00000592444 PAIP2BQ9ULR5 123 aaKnown RBP3.35□□□□□ -1.87
ERCC1-216ENST00000592444 CARHSP1Q9Y2V2 147 aaKnown RBP3.35□□□□□ -1.87
ERCC1-216ENST00000592444 PUS1Q9Y606 427 aaKnown RBP eCLIP3.35□□□□□ -1.87
ERCC1-216ENST00000592444 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
ERCC1-216ENST00000592444 USH2AO75445 5202 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 TRAV8-2A0A0B4J237 113 aa3.34□□□□□ -1.87
ERCC1-216ENST00000592444 TRAV25A0A0B4J276 109 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms