RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 C2orf50Q96LR7 162 aa5.36□□□□□ -1.55
VMP1-213ENST00000591877 PAIP2BQ9ULR5 123 aaKnown RBP5.36□□□□□ -1.55
VMP1-213ENST00000591877 FXYD6-FXYD2A0A087WZ82 144 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 RNF222A6NCQ9 220 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 FAM25EA8MYX2 175 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 H3BP45 60 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 L7N2F9 121 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 MED6O75586 246 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 DEDDO75618 318 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 MPC2O95563 127 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 HLA-DRB4P13762 266 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 MIFP14174 115 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
VMP1-213ENST00000591877 SNRPD3P62318 126 aaKnown RBP5.35□□□□□ -1.55
VMP1-213ENST00000591877 POLR2GP62487 172 aaKnown RBP eCLIP5.35□□□□□ -1.55
VMP1-213ENST00000591877 ZNF345Q14585 488 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 LGALSLQ3ZCW2 172 aaPredicted RBP5.35□□□□□ -1.55
VMP1-213ENST00000591877 SPANXN5Q5MJ07 72 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 C1orf194Q5T5A4 169 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 LGALS9CQ6DKI2 356 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 CIB3Q96Q77 187 aaPredicted RBP5.35□□□□□ -1.55
VMP1-213ENST00000591877 MFFQ9GZY8 342 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 XCL2Q9UBD3 114 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 CELA1Q9UNI1 258 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 HLA-DRB4X5D2U9 266 aa5.35□□□□□ -1.55
VMP1-213ENST00000591877 KMT2AQ03164 3969 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 F6UB75 175 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 ARPC5O15511 151 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 IGKV3-20P01619 116 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 FABP1P07148 127 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 CXCL2P19875 107 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 HLA-DMBP28068 263 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 S100A11P31949 105 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 NUP62P37198 522 aaPredicted RBP5.34□□□□□ -1.55
VMP1-213ENST00000591877 FXYD7P58549 80 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 IL15RAQ13261 267 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 IAH1Q2TAA2 248 aaPredicted RBP5.34□□□□□ -1.55
VMP1-213ENST00000591877 ZNF705AQ6ZN79 300 aaPredicted RBP5.34□□□□□ -1.55
VMP1-213ENST00000591877 Q6ZTC4 211 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 ACOT7LQ6ZUV0 252 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 ZNF767PQ75MW2 155 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 ZNF546Q86UE3 836 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 LINC00052Q96N35 136 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 SAV1Q9H4B6 383 aaPredicted RBP5.34□□□□□ -1.55
VMP1-213ENST00000591877 TNFSF18Q9UNG2 199 aa5.34□□□□□ -1.55
VMP1-213ENST00000591877 VPS13DQ5THJ4 4388 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 FRAS1Q86XX4 4008 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 A0A0D9SG52 128 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 ZNF98A6NK75 572 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 ZNF705FA8MVS1 300 aaPredicted RBP5.33□□□□□ -1.56
VMP1-213ENST00000591877 C11orf94C9JXX5 98 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 H3BTX0 84 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 ZNF705DP0CH99 300 aaPredicted RBP5.33□□□□□ -1.56
VMP1-213ENST00000591877 ZNF705BP0CI00 300 aaPredicted RBP5.33□□□□□ -1.56
VMP1-213ENST00000591877 PSMB3P49720 205 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 C12orf74Q32Q52 190 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 FFAR4Q5NUL3 377 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 TMEM14EPQ6UXP3 125 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 FOXI2Q6ZQN5 318 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 TMEM144Q7Z5S9 345 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 LINC00518Q8N0U6 118 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 OR8I2Q8N0Y5 310 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 KCNRGQ8N5I3 272 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 OR10G7Q8NGN6 311 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 SMIM8Q96KF7 97 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 SCRT1Q9BWW7 348 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 ARL6Q9H0F7 186 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 SLC35B3Q9H1N7 401 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 SLC25A22Q9H936 323 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 PSENENQ9NZ42 101 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 MBD2Q9UBB5 411 aa5.33□□□□□ -1.56
VMP1-213ENST00000591877 TRAV8-2A0A0B4J237 113 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 TRAV10A0A0B4J240 114 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 A0A0J9YX75 114 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 A8MTW9 85 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 IGLL5B9A064 214 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 H3BRN7 92 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 K7EQD1 137 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 ISLRO14498 428 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 SSSCA1O60232 199 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 CFDP00746 253 aaPredicted RBP5.32□□□□□ -1.56
VMP1-213ENST00000591877 RLN2P04090 185 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 ORM2P19652 201 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 ID1P41134 155 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 TCTAP57738 103 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 NUTF2P61970 127 aaKnown RBP5.32□□□□□ -1.56
VMP1-213ENST00000591877 AKR1C1Q04828 323 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 NDUFA5Q16718 116 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 FAM78BQ5VT40 261 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 AMTNQ6UX39 209 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 CYP2G1PQ6ZSU1 146 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 TMUB2Q71RG4 321 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 SLC51BQ86UW2 128 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 C1orf158Q8N1D5 194 aa5.32□□□□□ -1.56
VMP1-213ENST00000591877 INO80EQ8NBZ0 244 aaPredicted RBP5.32□□□□□ -1.56
VMP1-213ENST00000591877 BPIFCQ8NFQ6 507 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms