RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 HLA-DRB4P13762 266 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 ZNF124Q15973 351 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 DEFB125Q8N687 156 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 FMC1Q96HJ9 113 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 HLA-DRB4X5D2U9 266 aa12.55□□□□□ -0.4
HMG20B-215ENST00000585741 NDUFS6O75380 124 aaKnown RBP12.54□□□□□ -0.4
HMG20B-215ENST00000585741 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
HMG20B-215ENST00000585741 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
HMG20B-215ENST00000585741 ERCC8Q13216 396 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 NDUFA5Q16718 116 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 PRNTQ86SH4 94 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 TMEM75Q8N9X5 138 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 C11orf52Q96A22 123 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
HMG20B-215ENST00000585741 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 SRP19P09132 144 aaKnown RBP12.53□□□□□ -0.4
HMG20B-215ENST00000585741 ZNF138P52744 262 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 VGLL1Q99990 258 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 PSG8Q9UQ74 426 aa12.53□□□□□ -0.4
HMG20B-215ENST00000585741 SORL1Q92673 2214 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 TRAV8-1A0A0A6YYK1 113 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 H3BMM0 161 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 TSPOP30536 169 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 SRSF3P84103 164 aaKnown RBP12.52□□□□□ -0.41
HMG20B-215ENST00000585741 C2CD4CQ8TF44 421 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 AGPAT4-IT1Q9H0P7 198 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 C19orf73Q9NVV2 129 aa12.52□□□□□ -0.41
HMG20B-215ENST00000585741 RPL35AP18077 110 aaKnown RBP12.51□□□□□ -0.41
HMG20B-215ENST00000585741 LEPP41159 167 aa12.51□□□□□ -0.41
HMG20B-215ENST00000585741 RPL35P42766 123 aaKnown RBP12.51□□□□□ -0.41
HMG20B-215ENST00000585741 TAS2R60P59551 318 aa12.51□□□□□ -0.41
HMG20B-215ENST00000585741 TMEM183BQ1AE95 376 aa12.51□□□□□ -0.41
HMG20B-215ENST00000585741 SOHLH1Q5JUK2 328 aa12.51□□□□□ -0.41
HMG20B-215ENST00000585741 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
HMG20B-215ENST00000585741 LINC00479Q96M42 142 aa12.51□□□□□ -0.41
HMG20B-215ENST00000585741 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 GNG4P50150 75 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 BAGE2Q86Y30 109 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 Q8N1Y9 231 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 Q8TAT8 98 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 CITED4Q96RK1 184 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 SMIM7Q9BQ49 75 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 PARLQ9H300 379 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 ZNF492Q9P255 531 aa12.5□□□□□ -0.41
HMG20B-215ENST00000585741 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
HMG20B-215ENST00000585741 FAM74A3Q4VXF1 159 aa12.49□□□□□ -0.41
HMG20B-215ENST00000585741 Q86TA4 180 aa12.49□□□□□ -0.41
HMG20B-215ENST00000585741 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
HMG20B-215ENST00000585741 EIF4E3Q8N5X7 224 aaKnown RBP12.49□□□□□ -0.41
HMG20B-215ENST00000585741 DERL1Q9BUN8 251 aa12.49□□□□□ -0.41
HMG20B-215ENST00000585741 ZFP30Q9Y2G7 519 aa12.49□□□□□ -0.41
HMG20B-215ENST00000585741 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
HMG20B-215ENST00000585741 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
HMG20B-215ENST00000585741 J3KRW8 73 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 K7EIL1 84 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 GPX1P07203 203 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 CT45A10P0DMU9 189 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 IGHV4-30-4P0DP06 118 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-215ENST00000585741 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 TENM3Q9P273 2699 aa12.48□□□□□ -0.41
HMG20B-215ENST00000585741 TRBV6-1A0A0K0K1D8 114 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 C9JQL5 133 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 AMBPP02760 352 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 CDKN1BP46527 198 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 APOC4P55056 127 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 FXYD7P58549 80 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 CENPWQ5EE01 88 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 CLUHP3Q96NS8 147 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 C1QTNF4Q9BXJ3 329 aa12.47□□□□□ -0.41
HMG20B-215ENST00000585741 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 F8W036 122 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 LTAP01374 205 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 IGLV2-11P01706 119 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 MGST1P10620 155 aaKnown RBP12.46□□□□□ -0.41
HMG20B-215ENST00000585741 SPINK13Q1W4C9 94 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 SMUG1Q53HV7 270 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 ASCL2Q99929 193 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 NIPSNAP3BQ9BS92 247 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 BIN3Q9NQY0 253 aa12.46□□□□□ -0.41
HMG20B-215ENST00000585741 C9JCJ5 164 aa12.45□□□□□ -0.42
HMG20B-215ENST00000585741 M0R2Z0 102 aa12.45□□□□□ -0.42
HMG20B-215ENST00000585741 TMEM241Q24JQ0 296 aa12.45□□□□□ -0.42
HMG20B-215ENST00000585741 SLC7A5P1Q8MH63 180 aa12.45□□□□□ -0.42
HMG20B-215ENST00000585741 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
HMG20B-215ENST00000585741 CSTL1Q9H114 145 aa12.45□□□□□ -0.42
HMG20B-215ENST00000585741 TMEM218A2RU14 115 aa12.44□□□□□ -0.42
HMG20B-215ENST00000585741 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
HMG20B-215ENST00000585741 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
HMG20B-215ENST00000585741 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms