RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 PIK3C2AO00443 1686 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 ZFHX4Q86UP3 3567 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 CELSR1Q9NYQ6 3014 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TRPM1Q7Z4N2 1603 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 TANC2Q9HCD6 1990 aa0.23□□□□□ -2.37
SMCHD1-207ENST00000581711 NCAPD3P42695 1498 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 CAMSAP2Q08AD1 1489 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 MUC4Q99102 2169 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 NINQ8N4C6 2090 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 ADGBQ8N7X0 1667 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 TRAV23DV6A0A075B6W5 121 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 A0A096LPI6 279 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 GPR31O00270 319 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 TCTAP57738 103 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 GNG3P63215 75 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 HBBP68871 147 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 EIF3IQ13347 325 aaKnown RBP0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 POU6F1Q14863 301 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 MSMO1Q15800 293 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 C1orf140Q5VVS0 124 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 CROCCP2Q86T23 111 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 FAM216BQ8N7L0 139 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 NUP35Q8NFH5 326 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 AP3S1Q92572 193 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 RTL8AQ9BWD3 113 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 RNF11Q9Y3C5 154 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 ASB4Q9Y574 426 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 TLN2Q9Y4G6 2542 aa0.22□□□□□ -2.37
SMCHD1-207ENST00000581711 CD109Q6YHK3 1445 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 EIF3AQ14152 1382 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 TLN1Q9Y490 2541 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 ANKRD31Q8N7Z5 1873 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 NUP210Q8TEM1 1887 aaPredicted RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 C9orf170A2RU37 121 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 C5orf67F2Z3F1 127 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 MFSD11O43934 449 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 CST7O76096 145 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 IDO1P14902 403 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 RPL35P42766 123 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 TAS2R41P59536 307 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 MIR22HGQ0VDD5 57 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 RTL8BQ17RB0 113 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 SPINK9Q5DT21 86 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 GLIPR1L1Q6UWM5 242 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 PHF5AQ7RTV0 110 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 STX19Q8N4C7 294 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 SMIM20Q8N5G0 67 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 NEK7Q8TDX7 302 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 PLEKHB2Q96CS7 222 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 OR2H1Q9GZK4 316 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 NIT2Q9NQR4 276 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 LAMTOR3Q9UHA4 124 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 BOKQ9UMX3 212 aaPredicted RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 NISCHQ9Y2I1 1504 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 DSPP15924 2871 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 REV3LO60673 3130 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 LAMA2P24043 3122 aaKnown RBP0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 ERBINQ96RT1 1412 aa0.21□□□□□ -2.38
SMCHD1-207ENST00000581711 CEP350Q5VT06 3117 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 TEX15Q9BXT5 2789 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 TRBV30A0A0K0K1B3 111 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 NUPR2A6NF83 97 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 ZNF727A8MUV8 499 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 H3BQV1 296 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 K7EIL1 84 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 PIAS1O75925 651 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 IGHV3-33P01772 117 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 MT-ND6P03923 174 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 CSN2P05814 226 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 CD14P08571 375 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 GLRXP35754 106 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 FXYD4P59646 89 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 DIAPH2-AS1Q14236 149 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 LTC4SQ16873 150 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 OCIAD2Q56VL3 154 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 FKBP1CQ5VVH2 108 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 FOXI2Q6ZQN5 318 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 LINC00299Q6ZSB3 139 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 LYG2Q86SG7 212 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 ATOH7Q8N100 152 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 FAM24BQ8N5W8 94 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 CDC26Q8NHZ8 85 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 CST11Q9H112 138 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 BIN3Q9NQY0 253 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 MED11Q9P086 117 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 TPRKBQ9Y3C4 175 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 UFC1Q9Y3C8 167 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 CEP295Q9C0D2 2601 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 ATG2AQ2TAZ0 1938 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 YTHDC2Q9H6S0 1430 aaKnown RBP0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 VCANP13611 3396 aa0.2□□□□□ -2.38
SMCHD1-207ENST00000581711 RTL9Q8NET4 1388 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 FRMPD1Q5SYB0 1578 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 SPEGQ15772 3267 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 IGF2RP11717 2491 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 ANK1P16157 1881 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 TRPM7Q96QT4 1865 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 A0A0D9SG42 100 aa0.19□□□□□ -2.38
SMCHD1-207ENST00000581711 KPNA4O00629 521 aaPredicted RBP0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms