RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 RBAKDNA6NC62 111 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 B4DEV8 164 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 F6UB75 175 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 M0QZ24 198 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 CSN1S1P47710 185 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 TFPI2P48307 235 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 CD300EQ496F6 205 aaPredicted RBP9.81□□□□□ -0.84
CTC1-203ENST00000578240 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
CTC1-203ENST00000578240 S100A9P06702 114 aaKnown RBP9.8□□□□□ -0.84
CTC1-203ENST00000578240 ZNF705DP0CH99 300 aaPredicted RBP9.8□□□□□ -0.84
CTC1-203ENST00000578240 ZNF705BP0CI00 300 aaPredicted RBP9.8□□□□□ -0.84
CTC1-203ENST00000578240 WFDC3Q8IUB2 231 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 ZC2HC1AQ96GY0 325 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 SFRP2Q96HF1 295 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 ZNF688P0C7X2 276 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 GDF5OSQ5U4N7 250 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 C9orf47Q6ZRZ4 202 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 TMEM183AQ8IXX5 376 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 AGPAT4-IT1Q9H0P7 198 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 RNASE7Q9H1E1 156 aaKnown RBP9.8□□□□□ -0.84
CTC1-203ENST00000578240 CLEC5AQ9NY25 188 aa9.8□□□□□ -0.84
CTC1-203ENST00000578240 NPIPB6E9PJ23 425 aa9.79□□□□□ -0.84
CTC1-203ENST00000578240 K7EQM0 130 aa9.79□□□□□ -0.84
CTC1-203ENST00000578240 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
CTC1-203ENST00000578240 COX8CQ7Z4L0 72 aa9.79□□□□□ -0.84
CTC1-203ENST00000578240 DYNLRB2Q8TF09 96 aa9.79□□□□□ -0.84
CTC1-203ENST00000578240 PRR25Q96S07 402 aa9.79□□□□□ -0.84
CTC1-203ENST00000578240 ZNF256Q9Y2P7 627 aaPredicted RBP9.79□□□□□ -0.84
CTC1-203ENST00000578240 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
CTC1-203ENST00000578240 CRIP1P50238 77 aa9.78□□□□□ -0.84
CTC1-203ENST00000578240 TMEM242Q9NWH2 141 aa9.78□□□□□ -0.84
CTC1-203ENST00000578240 V9GYV3 84 aa9.78□□□□□ -0.84
CTC1-203ENST00000578240 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 IGLV1-51P01701 117 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 PF4P02776 101 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.84
CTC1-203ENST00000578240 PSMG4Q5JS54 123 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 SAMD13Q5VXD3 122 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 PRR27Q6MZM9 219 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 OR8A1Q8NGG7 326 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.84
CTC1-203ENST00000578240 SAP30O75446 220 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 PRR9Q5T870 116 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 FAM231DQ6ZW35 169 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 FAM19A4Q96LR4 140 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 OSTCQ9NRP0 149 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 PPP1R14DQ9NXH3 145 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 ZNF492Q9P255 531 aa9.77□□□□□ -0.85
CTC1-203ENST00000578240 FBLL1A6NHQ2 334 aaKnown RBP9.76□□□□□ -0.85
CTC1-203ENST00000578240 H7BYZ3 331 aa9.76□□□□□ -0.85
CTC1-203ENST00000578240 ID1P41134 155 aa9.76□□□□□ -0.85
CTC1-203ENST00000578240 IBA57Q5T440 356 aaKnown RBP9.76□□□□□ -0.85
CTC1-203ENST00000578240 OR10G8Q8NGN5 311 aa9.76□□□□□ -0.85
CTC1-203ENST00000578240 ANAPC16Q96DE5 110 aa9.76□□□□□ -0.85
CTC1-203ENST00000578240 SPAG8Q99932 426 aaPredicted RBP9.76□□□□□ -0.85
CTC1-203ENST00000578240 TUBA4BQ9H853 241 aa9.76□□□□□ -0.85
CTC1-203ENST00000578240 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
CTC1-203ENST00000578240 TRAV25A0A0B4J276 109 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 A0A0J9YX75 114 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 COLCA2A8K830 154 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 CA1P00915 261 aaPredicted RBP9.75□□□□□ -0.85
CTC1-203ENST00000578240 PFN1P07737 140 aaKnown RBP9.75□□□□□ -0.85
CTC1-203ENST00000578240 CT45A10P0DMU9 189 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 ZNF138P52744 262 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 ERVFC1-1P60608 527 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
CTC1-203ENST00000578240 ELOBQ15370 118 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 ZNF124Q15973 351 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 ODF3L2Q3SX64 289 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 RBPMS2Q6ZRY4 209 aaKnown RBP9.75□□□□□ -0.85
CTC1-203ENST00000578240 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 ZNF747Q9BV97 191 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 MAP6D1Q9H9H5 199 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 URGCP-MRPS24S4R325 110 aa9.75□□□□□ -0.85
CTC1-203ENST00000578240 SNRPD3P62318 126 aaKnown RBP9.74□□□□□ -0.85
CTC1-203ENST00000578240 TMEM78Q5T7P6 136 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 Q6ZQT7 251 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 ZFAND2AQ8N6M9 145 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.74□□□□□ -0.85
CTC1-203ENST00000578240 CXorf65A6NEN9 183 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 CXCL1P09341 107 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 CD33P20138 364 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 KIR3DS1Q14943 382 aa9.74□□□□□ -0.85
CTC1-203ENST00000578240 SAV1Q9H4B6 383 aaPredicted RBP9.74□□□□□ -0.85
CTC1-203ENST00000578240 DEFB131AP59861 70 aa9.73□□□□□ -0.85
CTC1-203ENST00000578240 PAFAH1B2P68402 229 aa9.73□□□□□ -0.85
CTC1-203ENST00000578240 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
CTC1-203ENST00000578240 SAPCD1Q5SSQ6 148 aa9.73□□□□□ -0.85
CTC1-203ENST00000578240 ZNF575Q86XF7 245 aa9.73□□□□□ -0.85
CTC1-203ENST00000578240 APRG1Q8IVJ8 170 aa9.73□□□□□ -0.85
CTC1-203ENST00000578240 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
CTC1-203ENST00000578240 TGIF2-C20orf24A0A0A6YYL0 155 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms